LOCUS BC056262 1330 bp mRNA linear HUM 24-MAR-2009
DEFINITION Homo sapiens mitochondrial carrier triple repeat 1 pseudogene, mRNA
(cDNA clone IMAGE:6618254).
ACCESSION BC056262
VERSION BC056262.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1330
/db_xref="H-InvDB:HIT000054153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6618254"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 421 a 269 c 280 g 360 t
ORIGIN
1 ggggggcgcg cgcggaatca gttgagactc ttcggttccc ggctctttct cctgcgactg
61 gggaaatgga cgcctggaga acggaaatcc agttatcaaa attgactcca gaagagagaa
121 cctaacagaa caataacaat ggaagaaatt gggaatatta tcaaaaagct atcattctgt
181 taaactccag gcttggatgg tgttacaggt ttaaaaaaaa aaaaaagaaa aagtccttca
241 tgaaaaaaga agaacttaag caacatgatg gattcagaag ctcatggaaa gagaccacca
301 atactaacat cttcgaaaca agatatgtca cctcatatta cagatttagt gaaatgaagc
361 attacttgtg tggctgctgt gcagccttca acaacgtcgc aatcacattt ctcattcaga
421 aggtcctctt tccacaacag ctgtatggca tcaaaacggg ggatgcaata cttcagttga
481 gaacggatgg atttcgaaac ttgtatcggg gaatctttcc ccgattgatg cagaagacaa
541 ctacacttgc acttacgttt ggtctgtatg aggatttatc ctaccttctc cacaagcatg
601 tcagtgctcc agagtttgca acctgtggcg tggcagcagt gcttgcaggg acaacggaag
661 caattttcac ttcagacatt gcttcaagac cacaagcacc atgacaaatt tgccaacatt
721 tatcaggctt tcaaggcact gaaatgtcat ggaattggag agttttatcg agggttggtg
781 cccattcttt tccagaatgg actcagcaat gtcttttttt ttttcggcct tcgaggtcac
841 gttaaggagc atctgcctac cgcgacgact cacaattctc atttggtcaa tgattttatc
901 ggtggaggtc tattgggtgc catgttggga ttcctgtttt ttccaattaa tgttgtaaaa
961 actcgcatac agtctcagat tggtggggaa tttcagtctt tccccaaggt tttccaaaaa
1021 atctggctgg aacgggacag aaaactgata aatcttttca gaggttctca tctgaattac
1081 catctgtccc ttatctcttg gggcataatc aatgcaaagg ttatatgaaa aaaaacatca
1141 gttaagtgcc acttatcaac tgaatagacc ttctaagaag aatgcagttt ggcctcttcc
1201 ttaattggcc aaatacaagt tggtgtcata actccaggcc acagtgagtt atgggcaaag
1261 ctgttcctta agcatcaaca aaatagaata aaaggttcca atagtaaaaa aaaaaaaaaa
1321 aaaaaaaaaa
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