LOCUS BC056261 1420 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens SPT2, Suppressor of Ty, domain containing 1 (S.
cerevisiae), mRNA (cDNA clone MGC:62001 IMAGE:6616686), complete
cds.
ACCESSION BC056261
VERSION BC056261.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51702221.
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000054152"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:62001 IMAGE:6616686"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1420
/gene="SPTY2D1"
/gene_synonym="FLJ39441"
/db_xref="GeneID:144108"
/db_xref="HGNC:HGNC:26818"
/db_xref="IMGT/GENE-DB:26818"
/db_xref="MIM:26818"
CDS 95..1150
/gene="SPTY2D1"
/gene_synonym="FLJ39441"
/codon_start=1
/product="SPTY2D1 protein"
/protein_id="AAH56261.1"
/db_xref="GeneID:144108"
/db_xref="HGNC:HGNC:26818"
/db_xref="IMGT/GENE-DB:26818"
/db_xref="MIM:26818"
/translation="MDFREILMIASKGQGVNNVPKRYSLAVGPPKKDPKVKGVQSAAV
QAFLKRKEEELRRKALEEKRRKEELVKKRIELKHDKKARAMAKRTKDNFHGYNGIPIE
EKSKRQATESHTSQGTDREYEMEEENEFLEYNHAESEQEYEEEQEPPKVESKPKVPLK
SAPPPMNFTDLLRLAEKKQFEPVEIKVVKKSEERPMTAEELREREFLERKHRRKKLET
DGKLPPTVSKKAPSQKESVGTKLSKGSGDRHPSSKGMPLPHAEKKSRPSMANEKHLAL
SSSKSMPGERIKAGSGNSSQPSLREGHDKPVFNGAGKPHSSTSSPKHVWKENKYMKRD
WLFYFQCIEYIRLLFIF"
BASE COUNT 505 a 270 c 327 g 318 t
ORIGIN
1 ggggagtgca gttggctgta gctgggcgcc tcggttaggt gcgctgtcag tcctttccga
61 gtgcctggcc cagtctctcc cgcctcggcc caacatggac ttcagagaaa ttctcatgat
121 agcttccaag ggacaaggtg tcaacaatgt gccgaaaagg tatagtttgg cagtggggcc
181 tccaaaaaaa gacccaaaag ttaaaggtgt ccaatcagca gctgtacaag cttttcttaa
241 aaggaaagaa gaggagctga gacgaaaagc cttagaggag aaaaggagaa aagaggaact
301 agtgaaaaag cgaattgagc tcaaacatga caagaaagca agagctatgg ccaagaggac
361 aaaggataat ttccatggtt acaatgggat tcctattgag gaaaagtcaa agaggcaggc
421 aacagaaagc cataccagcc aaggaaccga ccgagagtat gaaatggaag aagagaatga
481 attcctcgag tacaatcacg cagagtcaga gcaggagtat gaggaagagc aagaacctcc
541 caaagttgaa agcaaaccaa aggtccccct taaaagtgcc ccaccaccca tgaacttcac
601 tgatttactc aggctggctg agaaaaagca gtttgaacca gtggaaatca aggtagtgaa
661 gaaatcagaa gagcgaccta tgaccgcaga agaacttagg gagcgagaat tccttgaacg
721 aaagcatagg agaaaaaaac ttgagacaga tggaaaacta cctccaactg tgtccaaaaa
781 ggcaccctct cagaaagaaa gtgtgggcac aaaacttagc aaaggttctg gagacaggca
841 tccttcttcc aaaggaatgc cccttcctca tgctgagaag aaatcaagac ccagcatggc
901 caatgagaaa cacctcgctt tgtcttcatc caaatccatg ccaggagaga ggatcaaggc
961 aggatctggc aatagctccc aaccctcact tcgtgagggc cacgacaaac ctgtttttaa
1021 tggagctgga aagcctcatt ccagcacctc ttcaccaaaa catgtttgga aagagaataa
1081 atatatgaag agagactggt tgttttattt tcaatgtatt gaatatatta gactactatt
1141 tattttctga gtggatgtga ttaaatattc agacgtttag tgtatgatta agagtgagat
1201 agagatttct ttggagtaat taaatccatc ctgtctttta cacaatggac aaatcaagtt
1261 aaaaaaattt ttagatagct tagcttgttt tctggtgctg ttgacctgca agagaatata
1321 cttttgcata tacaggtgaa agttttgcaa tttatgtata caagaaattg taggcattaa
1381 aaatatttta tcgaaaaaaa aaaaaaaaaa aaaaaaaaaa
//