LOCUS BC056240 645 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens small proline-rich protein 1B (cornifin), mRNA (cDNA clone IMAGE:6494770), complete cds. ACCESSION BC056240 VERSION BC056240.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 645) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 645) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: NCI cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 48 Row: i Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507186 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..645 /db_xref="H-InvDB:HIT000054142" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6494770" /tissue_type="Pooled, 40 cell lines" /clone_lib="NIH_MGC_142" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..645 /gene="SPRR1B" /gene_synonym="CORNIFIN" /gene_synonym="GADD33" /db_xref="GeneID:6699" /db_xref="HGNC:HGNC:11260" /db_xref="MIM:182266" CDS 69..338 /gene="SPRR1B" /gene_synonym="CORNIFIN" /gene_synonym="GADD33" /codon_start=1 /product="small proline-rich protein 1B (cornifin)" /protein_id="AAH56240.1" /db_xref="GeneID:6699" /db_xref="HGNC:HGNC:11260" /db_xref="MIM:182266" /translation="MSSQQQKQPCIPPPQLQQQQVKQPCQPPPQEPCIPKTKEPCHPK VPEPCHPKVPEPCQPKVPEPCHPKVPEPCPSIVTPAPAQQKTKQK" BASE COUNT 186 a 205 c 124 g 130 t ORIGIN 1 ggggaccagt tctaagggac catacagagt attcctctct tcacaccagg accagccact 61 gttgcagcat gagttcccag cagcagaagc agccctgcat cccaccccct cagcttcagc 121 agcagcaggt gaaacagcct tgccagcctc cacctcagga accatgcatc cccaaaacca 181 aggagccctg ccaccccaag gtgcctgagc cctgccaccc caaagtgcct gagccctgcc 241 agcccaaggt tccagagcca tgccacccca aggtgcctga gccctgccct tcaatagtca 301 ctccagcacc agcccagcag aagaccaagc agaagtaatg tggtccacag ccatgccctt 361 gaggagccgg ccaccagatg ctgaatcccc tatcccattc tgtgtatgag tcccatttgc 421 cttgcaatta gcattctgtc tcccccaaaa aagaatgtgc tatgaagctt tctttcctac 481 acactctgag tctctgaatg aagctgaagg tcttagtacc agagctagtt ttcagctgct 541 cagaattcat ctgaagagag acttaagatg aaagcaaatg attcagctcc cttatacccc 601 cattaaattc actttcaatt ccaaaaaaaa aaaaaaaaaa aaaaa //