LOCUS BC056219 4465 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 29, mRNA (cDNA clone MGC:51309 IMAGE:5315083), complete cds. ACCESSION BC056219 VERSION BC056219.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4465) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4465) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: p Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67782361. FEATURES Location/Qualifiers source 1..4465 /db_xref="H-InvDB:HIT000054140" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51309 IMAGE:5315083" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4465 /gene="DHX29" /db_xref="GeneID:54505" /db_xref="HGNC:HGNC:15815" CDS 98..4207 /gene="DHX29" /codon_start=1 /product="DEAH (Asp-Glu-Ala-His) box polypeptide 29" /protein_id="AAH56219.1" /db_xref="GeneID:54505" /db_xref="HGNC:HGNC:15815" /translation="MGGKNKKHKAPAAAVVRAAVSASRAKSAEAGIAGEAQSKKPVSR PATAAAAAAGSREPRVKQGPKIYSFNSTNDSSGPANLDKSILKVVINNKLEQRIIGVI NEHKKQNNDKGMISGRLTAKKLQDLYMALQAFSFKTKDIEDAMTNTLLYGGDLHSALD WLCLNLSDDALPEGFSQEFEEQQPKSRPKFQSPQIQATISPPLQPKTKTYEEDPKSKP KKEEKNMEVNMKEWILRYAEQQNEEEKNENSKSLEEEEKFDPNERYLHLAAKLLDAKE QAATFKLEKNKQGQKEAQEKIRKFQREMETLEDHPVFNPAMKISHQQNERKKPPVATE GESALNFNLFEKSAAATEEEKDKKKEPHDVRNFDYTARSWTGKSPKQFLIDWVRKNLP KSPNPSFEKVPVGRYWKCRVRVIKSEDDVLVVCPTILTEDGMQAQHLGATLALYRLVK GQSVHQLLPPTYRDVWLEWSDAEKKREELNKMETNKPRDLFIAKLLNKLKQQQQQQQQ HSENKRENSEDPEESWENLVSDEDFSALSLESANVEDLEPVRNLFRKLQSTPKYQKLL KERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCN IVCTQHRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGV LLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSE KFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINV TSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAY LDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAA AFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK ASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSP EDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIF GAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWK KARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRA SQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVN RDLQTHGWLLYQEKIRYARVYLRETTLITPFPVLLFGGDIEVQHRERLLSIDGWIYFQ APVKIAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENN" BASE COUNT 1498 a 829 c 959 g 1179 t ORIGIN 1 gtggcagccc cggagccggg gaatgtgaag agctctcggc tgtgcagtgg taccgtcggg 61 gcctgggccg cgaaggatct tctgccacag ctgcaacatg ggcggcaaga acaagaaaca 121 caaggctcca gcggccgcgg tggtccgggc cgccgtgtct gcttccagag ccaaatctgc 181 cgaggctgga attgccgggg aggcccaaag caagaagcca gtgtccaggc cggccaccgc 241 tgccgctgcc gctgccggct ccagggagcc ccgtgtcaag caaggtccaa aaatttatag 301 ttttaattct acaaatgatt ctagtggtcc tgcaaatctg gataaatcta ttttgaaagt 361 ggtaattaat aacaaactag agcaaagaat tattggagtg atcaatgagc ataaaaagca 421 aaataatgac aaaggaatga tttctggaag acttactgcc aaaaaattgc aggatttata 481 catggcttta caagcatttt catttaagac aaaggacatt gaagatgcca tgaccaatac 541 actcttatat ggaggtgacc ttcattctgc cttggattgg ctctgtttaa acctttcaga 601 tgatgcactt cctgaaggat tcagtcagga atttgaagag cagcaaccta aaagtaggcc 661 taaatttcag tctcctcaaa tacaagccac tatttcacct ccattgcaac ctaaaacaaa 721 aacatatgaa gaggacccta agagtaagcc aaaaaaggaa gaaaaaaata tggaagtaaa 781 tatgaaagag tggattttac gatatgctga acaacaaaat gaagaagaga agaatgagaa 841 ttctaaaagt ttagaagagg aggaaaaatt tgaccctaat gaaaggtact tacatcttgc 901 agcaaaactg ctggatgcaa aagaacaagc agctaccttt aaactagaaa aaaacaagca 961 aggccaaaaa gaggctcagg aaaaaataag gaaatttcaa agagaaatgg aaactttaga 1021 agaccatcca gtatttaacc cagccatgaa gatttcacat caacaaaatg aaaggaaaaa 1081 gcctcctgta gccacagaag gagaaagtgc attgaatttt aatttatttg aaaaatctgc 1141 agctgctact gaagaagaga aagataaaaa gaaagaacct catgatgtaa gaaattttga 1201 ctatactgct cgaagttgga ctggaaaatc tcccaaacaa tttctgattg attgggtcag 1261 gaagaatctt cccaagagtc caaatccttc ctttgaaaaa gttccagtag gtagatactg 1321 gaaatgtagg gttagggtaa tcaagtctga agatgatgtc ctggtagtat gccctacaat 1381 cttaacagaa gatggcatgc aagctcagca cctgggagct actttagccc tttaccgttt 1441 agttaaaggg cagtcagttc atcagttact tcctcccact taccgagatg tttggctgga 1501 gtggagtgat gcagaaaaga aaagggaaga attaaataaa atggaaacca ataaaccacg 1561 tgatcttttt attgccaaac ttctgaataa actgaaacag cagcaacagc agcaacaaca 1621 gcattctgaa aataagagag aaaactctga agatcccgag gaatcttggg aaaatttagt 1681 ttcggatgag gatttttctg cactgtcctt ggaatcagca aatgtggaag atttggaacc 1741 tgttagaaac ctctttagaa agttgcaaag cacacctaag tatcagaaac ttctaaagga 1801 aagacaacag ctacctgtat ttaaacatcg ggactcaatt gttgaaactc ttaaaaggca 1861 tcgggtagtg gttgtggcag gtgaaacagg gagtggtaaa agtactcagg taccacattt 1921 tctattggaa gatttgcttc taaatgagtg ggaagcaagt aaatgtaaca ttgtctgtac 1981 ccaacaccga agaatctcag cagttagttt agccaacaga gtatgtgatg aattgggctg 2041 tgaaaatgga cctggaggaa ggaattcctt gtgtggatat cagatccgga tggaatctcg 2101 agcttgtgaa tctaccaggt tactctattg tacaacaggg gttttgctaa ggaaacttca 2161 agaagatggt cttctaagta atgtgtctca tgttattgta gatgaggttc atgaaagaag 2221 tgtccagtca gacttcctac taattatctt gaaggaaatt ttacagaaac gttctgatct 2281 acacttgatt ctaatgagtg ccactgtgga cagcgaaaaa ttttctacat atttcacaca 2341 ctgccccatt ctcagaattt caggaaggag ttatcctgtt gaggtttttc atcttgaaga 2401 tataatagaa gaaacaggct ttgtactgga aaaagactca gaatattgtc agaaatttct 2461 ggaagaggaa gaagaagtaa ccattaatgt tacaagcaaa gcagggggaa taaaaaaata 2521 tcaggaatac atcccagttc agactggagc acatgctgat ttaaatccat tttaccaaaa 2581 gtacagcagc cgcactcagc atgctattct atacatgaat cctcataaaa tcaacctgga 2641 tctcattttg gaacttcttg catacttaga taaaagtccc caattcagaa atattgaagg 2701 agcagtattg atctttttac caggacttgc tcatattcag cagttgtatg atcttctatc 2761 aaatgataga agattttatt ctgaacgata taaagtgata gctctgcatt ctattctttc 2821 aacccaagat caagctgcag cattcacact tccccctcca ggagtcagga agattgtttt 2881 agcaaccaat attgcagaga cgggtatcac tattcctgat gttgtatttg taattgatac 2941 tggaagaaca aaagaaaata agtaccatga aagcagtcag atgagttctt tggtggagac 3001 gtttgtcagt aaagccagtg ctttgcagcg ccagggaaga gctgggcggg tcagagatgg 3061 cttctgtttc cgaatgtaca caagagaaag atttgaaggc tttatggatt attctgttcc 3121 tgaaatctta cgtgtacctt tggaggaatt atgccttcat attatgaaat gtaatcttgg 3181 ttctcctgaa gatttcctct ccaaagcctt agatcctcct cagctccaag tgatcagcaa 3241 tgcaatgaat ttgctccgaa aaattggagc ttgtgaatta aatgagccta aactgactcc 3301 gttgggccaa caccttgcag ctttacctgt gaatgtcaag attggcaaga tgcttatttt 3361 tggtgccata tttggctgcc ttgacccagt ggcaacacta gctgcagtta tgacagagaa 3421 gtctcctttt accacaccaa ttggtcgaaa agatgaagca gatcttgcaa aatcagcttt 3481 ggccatggcg gattcagacc acctgacgat ctacaatgca tatctaggat ggaagaaagc 3541 acgacaagaa ggaggttatc gttctgaaat cacatactgc cggaggaact ttcttaatag 3601 aacatcactg ttaaccctag aggatgtaaa gcaggagtta ataaagttgg ttaaggcagc 3661 aggattttca tcttccacaa cttctaccag ctgggaagga aacagagcct cacagaccct 3721 ctcattccaa gaaattgccc ttcttaaagc tgtactggtg gctggactgt atgacaatgt 3781 ggggaagata atctatacaa agtcagtgga tgttacagaa aaattggctt gcattgtgga 3841 gacggcccaa ggcaaagcac aagtacaccc atcctcagta aatcgagatt tgcaaactca 3901 tggatggctc ttataccagg agaagataag gtatgccaga gtgtatttga gagaaactac 3961 cctaataacc ccttttccag ttttactttt tggtggtgat atagaagttc agcaccgaga 4021 acgtcttctt tctattgatg gctggatcta ttttcaggcc cctgtaaaga tagctgtcat 4081 tttcaagcag ctgagagttc tcattgattc agttttaaga aaaaagcttg aaaatccaaa 4141 gatgtccctt gaaaatgaca agattctgca gatcattacg gaattgataa aaacagagaa 4201 taactgaaac tgaaattcat ggtcaactgc tttaaaaatt aagatgaaga tacagtcatg 4261 aaattatctg aaaatgggtc atcacattaa gtatttcatt acttaaaatg ttggtactag 4321 ccattaactt aaaggtggtg ggaaaaaagc acatacttta aacatgtata attttctagg 4381 tcctttttaa tgatgattat tctgaatgta tttgccacta catttacaat aaattctttg 4441 gtattatgca aaaaaaaaaa aaaaa //