LOCUS BC055429 4396 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens junctophilin 4, mRNA (cDNA clone MGC:51174 IMAGE:5262644), complete cds. ACCESSION BC055429 VERSION BC055429.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4396) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4396) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 90 Row: n Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33859758. FEATURES Location/Qualifiers source 1..4396 /db_xref="H-InvDB:HIT000054126" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51174 IMAGE:5262644" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4396 /gene="JPH4" /gene_synonym="hJP-4" /gene_synonym="KIAA1831" /db_xref="GeneID:84502" /db_xref="HGNC:HGNC:20156" CDS 904..2790 /gene="JPH4" /gene_synonym="hJP-4" /gene_synonym="KIAA1831" /codon_start=1 /product="junctophilin 4" /protein_id="AAH55429.1" /db_xref="GeneID:84502" /db_xref="HGNC:HGNC:20156" /translation="MSPGGKFDFDDGGCYVGGWEAGRAHGYGVCTGPGAQGEYSGCWA HGFESLGVFTGPGGHSYQGHWQQGKREGLGVERKSRWTYRGEWLGGLKGRSGVWESVS GLRYAGLWKDGFQDGYGTETYSDGGTYQGQWQAGKRHGYGVRQSVPYHQAALLRSPRR TSLDSGHSDPPTPPPPLPLPGDEGGSPASGSRGGFVLAGPGDADGASSRKRTPAAGGF FRRSLLLSGLRAGGRRSSLGSKRGSLRSEVSSEVGSTGPPGSEASGPPAAAPPALIEG SATEVYAGEWRADRRSGFGVSQRSNGLRYEGEWLGNQRHGYGRTTRPDGSREEGKYKR NRLVHGGRVRSLLPLALRRGKVKEKVDRAVEGARRAVSAARQRQEIAAARAADALLKA VAASSVAEKAVEAARMAKLIAQDLQPMLEAPGRRPRQDSEGSDTEPLDEDSPGVYENG LTPSEGSPELPSSPASSRQPWRPPACRSPLPPGGDQGPFSSPKAWPEEWGGAGAQAEE LAGYEAEDEAGMQGPGPRDGSPLLGGCSDSSGSLREEEGEDEEPLPPLRAPAGTEPEP IAMLVLRGSSSRGHDAGCLTEELGEPAATERPAQPGAANPLVVGAVALLDLSLAFLFS QLLT" BASE COUNT 829 a 1418 c 1262 g 887 t ORIGIN 1 atctccttct cctctctgcc tgcctcctcc ctcaccgaag ggttagcgga cacccatcct 61 tttctgcttg gggaccccac caccacccgc aacactgccg ctgtctcttc ttcaccgtat 121 ccttctctac ccaccctctt ctctcttctc ttctccctgc ccctttaaat ctgcctggcc 181 cagcctcccc cgtgatgctg ggatggagca aacattgatt tgtgctggga tggaatcgga 241 attttgattt atttttcctc tcccaaccat aagaagaaaa aaataataaa aacaccccct 301 cttgagagcc ccctccccct ttgcatccag ctcccagctc ttcttcccta tctccatcca 361 aggcagattt tttcccctac actattctca tcttccccca cccttgccac tacctcgccc 421 ccccacccag cctgctcctc cagctgggga gagaggggac tctccggact cccccacctt 481 tcctctctgg gttggagcag tctctccgga aggggagggg gcttggcttg tccgggcgag 541 gtgggagtgg aggtatcctg ccatggatgc tgtgccgggg aggcagcctg agccccagcc 601 cacatgagac gccgaagaac cggggcagag gggtcctgac agcagccagg gaaacgggtg 661 ccctacgatt ctgcccagcc ccctctcagg acccccaaac tgccatccac actcgacact 721 tcggggttct agccactcag gatgagggtc cggccctgcc tgccctcgct ggggcccccc 781 cgcccggccc cggtctaact gcccccgccc cgaggcctcg cccggctcca aggcccccag 841 caggctctcc agtcccagga tgcgctgagc cgccgggggg ctgaggccgc gccaactaca 901 tgcatgtccc ccgggggcaa gttcgacttt gacgacgggg gctgctacgt ggggggctgg 961 gaggcggggc gggcacatgg ctacggcgtg tgcacgggcc ccggcgccca gggcgagtac 1021 agcggctgct gggcacacgg cttcgagtca ctgggcgtct tcacggggcc cggcggacac 1081 agctaccagg gccactggca gcagggcaag cgcgaagggc tgggcgtgga gcgcaagagc 1141 cgctggacgt accgcggcga gtggctgggc gggctgaagg ggcgcagcgg cgtgtgggaa 1201 agcgtgtccg gcctgcgcta cgccgggctc tggaaggacg gtttccagga cggctacggc 1261 actgagacct actccgacgg aggcacctac cagggccagt ggcaggccgg gaagcgccac 1321 ggctacgggg tacgccagag tgtgccctac catcaggcgg cgctgctgcg ctcgccccgc 1381 cgcacctccc tggattccgg ccacagcgac cccccgacgc cacccccgcc cctgcccttg 1441 ccgggcgacg agggaggcag ccccgcctcg ggctcccggg gcggcttcgt gctggccggg 1501 cccggggacg ccgacggcgc gtcgtcccga aagcgcactc cagcggccgg cggattcttt 1561 cgccgttcgc tgctgctcag cgggctccga gcgggcggac gtcgcagctc cctgggcagc 1621 aagcgaggct ccctgcgcag cgaggtgagc agcgaggtgg gcagcaccgg accgcccggc 1681 tcggaggcca gcgggccccc ggccgcagcg ccgcccgccc tcatcgaggg ctcggccaca 1741 gaggtgtacg cgggcgagtg gcgcgcagat cggcgcagcg gcttcggcgt cagccagcgc 1801 tccaacgggc tgcgctacga gggcgagtgg ctgggcaacc agcggcacgg ctacgggcgc 1861 accacccgcc ccgacggctc ccgcgaggag ggcaagtaca agcgcaaccg gctggtgcac 1921 ggcgggcgcg tccgcagtct cctgcctctg gcccttcggc ggggcaaggt taaggagaag 1981 gtggacaggg ctgtcgaggg cgcccgtcga gccgtgagtg ctgcccgtca gcgccaggag 2041 atcgccgctg ccagggcagc agacgccctc ctaaaggcag tggcagccag cagtgtcgct 2101 gagaaggccg tggaggcagc tcgaatggcc aaactgatag cccaggacct gcagcccatg 2161 ctagaggccc caggccgcag acccaggcag gactcagaag gttccgacac ggagcccctg 2221 gatgaggaca gccctggggt atatgagaac ggactgaccc cctcagaggg atcccctgaa 2281 ctgcccagca gtcctgcctc ctcccgccaa ccctggcgac cccctgcctg ccggagccca 2341 ctgcctcctg gaggggacca gggtcccttc tccagcccca aagcttggcc tgaggagtgg 2401 gggggggcag gcgcacaggc agaggaacta gctggctatg aggctgagga tgaggctggg 2461 atgcaagggc cagggcccag agacggttcc ccactcctcg gaggctgcag cgacagttca 2521 ggaagtcttc gagaggagga gggggaggat gaagagcccc tgcccccgct gagggcccca 2581 gcaggcacgg agcctgagcc catcgccatg ctggtcctga ggggctcgtc ctcgaggggt 2641 catgatgctg ggtgcctgac agaagagctc ggggagcccg ctgcaaccga gaggcctgcc 2701 cagccgggag ctgccaaccc cctggtggtg ggagccgtgg ccctcctgga cctcagcctg 2761 gcattcctgt tctcccagct cctcacctga ggctacttcc tggcctggtt ctggctttgg 2821 ttgcgtgcct cttcacccct ttgacctgcc ttttttctct tctcctcttc ctggctgtgt 2881 tttctcctat ctttctttct cttcttcctt tcttttctgt gctcctttgt ttttttctct 2941 cgctttttct ttccctgtct tctttcagat tatctcattt cttctggatc tgtctctgta 3001 ttcctcactc ccttccccat cccaacccct tctttctcta gattgtttac atatgaaggg 3061 cttttctctc tcagagttgc tgtcttctct gagacacaca aatctaagtc agaccattgc 3121 tccacgccct cccacctttt ctttagacct caacttcgct gcgggtgggg gtttggtgtc 3181 ctaaggagac tcctggaagc tgaatggaga ggaggaagaa aatgaagaag gagtgattga 3241 atgtcgggca aggcactggc tgagctgctg tggctcccta gcctaagggg cctgctgtcc 3301 ctctgaggcc tagtgaaaaa gctgcaggag gtgcatcctc cacctctaat cttggaggct 3361 attatcttac ctccaagcac tgagctgggt tactgcccaa ttccatcctt ccctgaagga 3421 gagaagggaa gtgaaaagta gagtaactcc ccagcatttc cctctttttc tcctcatcgg 3481 ccagcccctc ctccagcccc ctctggtggc atgccatgcc aagagcaacg tgtaaaggaa 3541 cagagaatat ccaatgcagt caagtccacc ctgcccagac tttgccactg acttctccca 3601 cccttctgtc tcccccataa tagtttattt ggttggtctg gactcacttg tggcctttga 3661 ttaaattcct aaggggcctg aagaagacat ttctactgca gagggttaga ggcacttgag 3721 caaggccccc acatcccaac tctgggagtt gtggtgggag gaggcacttc tgggggatag 3781 gaccagacaa gataacagga gctcacatgg aagcagaagc tgtgacaagt ttagtagtcc 3841 caaaatgggt tatatccctt ccccctttac atcagaatct tgtgaaatgg gaaaacaaca 3901 gaaggagggg atcaaagata gctgatctca catgcttccc aggcagggca gaggtgggag 3961 tcaaacccgg gtgacaggtg ggtggagagc actgtttgag gttgtggctg atccctctct 4021 ggtattagtt tttcccctgg gagcaggaag ccctaggaag aggggactgc agggtcccca 4081 ggggatcttt cctccctccc ctgcatgagg cagaggcaag ctgcctgcca accccctccc 4141 tcaaggaatg gccttgccca ggaatgccca ccacacatac cctcttcttt ttttctagtc 4201 aaactcttgt ttattccttg gcttgcctcc ctccttcctc ccctctcaac ctttacttct 4261 gatttctatt tcatggaatt tgggattgaa gttaaactac aacagtgcca ccaacaccaa 4321 gtcttgcagg aaaaaaatac aaagaaattt aacaaaaaaa atatattaat aaaaaagttc 4381 aaaaaaaaaa aaaaaa //