LOCUS BC054890 800 bp mRNA linear HUM 28-SEP-2004
DEFINITION Homo sapiens SP140 nuclear body protein, mRNA (cDNA clone
IMAGE:6498018), partial cds.
ACCESSION BC054890
VERSION BC054890.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 800)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361373.
FEATURES Location/Qualifiers
source 1..800
/db_xref="H-InvDB:HIT000259480"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6498018"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>800
/gene="SP140"
/gene_synonym="LYSP100-A"
/gene_synonym="LYSP100-B"
/db_xref="GeneID:11262"
/db_xref="MIM:608602"
CDS 86..>800
/gene="SP140"
/gene_synonym="LYSP100-A"
/gene_synonym="LYSP100-B"
/codon_start=1
/product="SP140 protein"
/protein_id="AAH54890.1"
/db_xref="GeneID:11262"
/db_xref="MIM:608602"
/translation="MAQQGQQGQMASGDSNLNFRMVAEIQNVEGQNLQEQVCPEPIFR
FFRENKVEIASAITRPFPFLMGLRDRSFISEQMYEHFQEAFRNLVPVTRVMYCVLSEL
EKTFGWSHLEALFSRINLMAYPDLNEIYRSFQNVCYEHSPLQMNNVNDLEDRPRLLPY
GKQENSNACHEMDDIAVPQEALSSSPRCEPGFSSESCEQLALPKAGGGDAEDAPSLLP
GGGVSCKLAIQKKKKKKKKK"
BASE COUNT 247 a 170 c 206 g 177 t
ORIGIN
1 gggggcagtt ggcagcttca cctcagagct gcaggaagga acggggcagt gaaaatcgaa
61 tcgggtgtga tcctaggcca agctcatggc ccagcagggc cagcaggggc agatggcaag
121 tggagacagc aatctcaact tcaggatggt cgcagagatc cagaacgtag agggtcagaa
181 cctgcaggag caggtttgcc ctgagcccat tttcaggttc ttcagagaaa acaaggtgga
241 gattgcaagt gcaataacaa ggccatttcc tttccttatg ggcctccgag accgctcctt
301 catctccgag cagatgtatg aacattttca agaagctttt agaaacctgg tcccagtgac
361 aagagtgatg tattgtgtac tcagtgaact ggagaagaca tttggctggt cacatctgga
421 agcattgttc agcaggatta acctgatggc ctatcctgat ttaaacgaga tttacagaag
481 cttccagaat gtatgctatg aacactcacc tctccaaatg aataatgtaa acgatttaga
541 agatagaccc agattactac catatggtaa acaagagaac agcaatgcct gtcatgaaat
601 ggatgatata gcagtgcctc aggaagcctt gagctcctcg ccaaggtgtg agccaggttt
661 ctcttcagag tcttgtgagc agttagctct cccaaaggct ggtggaggag atgctgaaga
721 tgcacccagc ctactaccag gtgggggagt gtcctgtaaa cttgctatac aaaaaaaaaa
781 aaaaaaaaaa aaaaaaaaaa
//