LOCUS BC054871 470 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens barrier to autointegration factor 2, mRNA (cDNA clone MGC:62093 IMAGE:6592641), complete cds. ACCESSION BC054871 VERSION BC054871.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 470) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 470) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JUL-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 48 Row: j Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62510080. FEATURES Location/Qualifiers source 1..470 /db_xref="H-InvDB:HIT000054095" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:62093 IMAGE:6592641" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..470 /gene="BANF2" /gene_synonym="BAF-L" /gene_synonym="BAF-Like" /gene_synonym="BAF2" /gene_synonym="BAFL" /db_xref="GeneID:140836" /db_xref="HGNC:HGNC:16172" CDS 116..388 /gene="BANF2" /gene_synonym="BAF-L" /gene_synonym="BAF-Like" /gene_synonym="BAF2" /gene_synonym="BAFL" /codon_start=1 /product="barrier to autointegration factor 2" /protein_id="AAH54871.1" /db_xref="GeneID:140836" /db_xref="HGNC:HGNC:16172" /translation="MDDMSPRLRAFLSEPIGEKDVCWVDGISHELAINLVTKGINKAY ILLGQFLLMHKNEAEFQRWLICCFGATECEAQQTSHCLKEWCACFL" BASE COUNT 127 a 125 c 117 g 101 t ORIGIN 1 gggggatttg ccccatgggc ctaagacata agctgaacct ctggcctgca gttccagatc 61 caaggtgact gagacaaact gccggctgcc actggcttat caggagcacc tggagatgga 121 cgacatgtct cccaggctga gagccttcct ctccgaaccc attggagaaa aggatgtctg 181 ctgggtggat ggcatcagcc atgagctcgc gatcaatttg gtcaccaaag gtatcaataa 241 ggcctacatc ctgctgggac aattccttct gatgcacaag aatgaagccg agtttcagag 301 gtggctcatt tgctgttttg gtgccactga gtgtgaggcc cagcagactt ctcactgcct 361 caaggagtgg tgtgcctgct tcctgtagac acaaacctca ttgctgcccc ccaccaccct 421 ctggggaaaa tgacgccttc tccacaaaaa aaaaaaaaaa aaaaaaaaaa //