LOCUS BC054505 5694 bp mRNA linear HTC 30-MAR-2005 DEFINITION Homo sapiens forkhead box P1, mRNA (cDNA clone IMAGE:5503553), with apparent retained intron. ACCESSION BC054505 VERSION BC054505.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5694) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5694) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUL-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: e Column: 3 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..5694 /db_xref="H-InvDB:HIT000259453_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5503553" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 1374 a 1411 c 1197 g 1712 t ORIGIN 1 tgcagcggtg tcccagaagc ttttgttgac aattccagtt tccgaacaaa acatttcggc 61 aatggtgagg gcttcgatcc cttctctgat ttgctgtcag ccatgaacgg atggatgtga 121 tgcctgctag ccaaaaggct tccctctgtg tgttgcagtc ctgtggcatt atgcatgccc 181 cctcccagtg accccaggct ttttatggct gtgagacacg ttaaaatttc aggacaggat 241 attgctgtgt tgcccaggct ggagcgccgt ggcacgatta tagctcactg taatttcgaa 301 ctcctgggct caagtgatcc tcccacctca gcctctgttg tagctgggac tacaggtatg 361 tgccaccatg cctggctaat gatttttaat ttttaattta atttaattta atttttttgt 421 agaggtgggg tctcactagg tttcccaggc tgatcttgaa ctcctggccc caagtgatcc 481 tcccaccttg gctgcccaaa gtgctaggat tacaagtgtg agccactcac tctttgcatt 541 attttttgat agttgtatta gatttgcatt ttcaggacat ttagccattt atatgatact 601 ctcccccttt taactctaac cctattgtac tttttagtaa tacaggtatg ttcagtgctc 661 agtaccagtt cttcagtgct tatgtcaatg tctgtagtca ttttgtctaa acttcatttc 721 tgttagattt tttggaaaag gctcatgggt actgtattcc ctgaattctt gaattttcgt 781 aacagtttgc tgtgttcttt atacttaaac cacaatcttt actgaattaa aaatgttgcc 841 tcacattttt tctttgcata tcttaaatat gttactcctt tttcttctgg cataataagt 901 cttaagtcca gtaattttat tagattatat cttagtgtcg gtcatttgga gcaaatatgc 961 ttcagtgtcc agggtccttt tgcaatatgt agtttcagaa tattttttta atttcaggaa 1021 tgtttctttg aattatagtt ttaggtattt ggacaatttt cttcctttgc tttcctctcc 1081 agggattcct actttttttt ctttcttctt ttagttttga gctttgtcac ccaggctgga 1141 gtacaatagc atgatcttgg ctcactgcaa cctgtgcctc ccaggttcaa acgattctca 1201 tgcctcagcc tcctgagtag ctgggactac aggcatgtgc caccatgcct ggctaatttt 1261 tgtcttttta gtagagacag aatttcacca tgttgaccag gctggtcttg aactcctggg 1321 ctcaagcagt cctcccacct tggcctcaca aagtggtggg ataacaggcg tgagccacca 1381 cacctgaccc agggattcct attttctata tgttggatct cctttacctg tcttcagtat 1441 tcgatacttt cccttaaatc cttctctctc tcttaatttc tgtttgattt tgtttttcat 1501 tttaaccttc tagttttttt taaagcgtta tttgttgtat ctatttgcta tctgtccctc 1561 tagtgtattt tcttatttct agaatgattt ttcttttttt caagtttatt ctttcttccc 1621 ccatttctca gccagtcgaa ttcttattta tgtaattctt ttttgtttat tttcttttgt 1681 tttgtttttt taagataggg tctcactctg tcattcaggc tgaagtgcag tggtgccatt 1741 tcagctcact gcaacctgtg cccccaggct caagcgatcc tcccacctca gcctcctaaa 1801 tagctgggat cacaggcacg caccaccaca cccagctatt tctttgtatt tttttgtggg 1861 gacagcgtct cgccatcttg ccctggctgg cttcaaactc gtgagtgcaa gtgatcctcc 1921 cacctcggcc tcccaaagtg ctgggattac aggtgtgagc cactgtacgt ggcttgattt 1981 atgtaattct ttcaggccgt atatcttatt cttaatgtct tttagctcat tttgaagtaa 2041 taggttacag acaagtaatt acatgtctga taaatgcttt cattttgtgt aagatgttat 2101 tctgttcctt ttttttatca ctttgtatag aattttacct caaaattttt atattgctca 2161 tttttacgtg aaagtgattt ttctgaactt ttagcagggt ggctgtatta agagagatct 2221 tctaattcct tagagctctc tctcttttgg gttactttct actacttggc tactggcatg 2281 ctttctaaaa tatctttact gtattcttct ctactttggg gaggcctttc tcttatcttt 2341 cctcttggtt ttctctgtcc tttttgattt tgattctgtt gccaggagtt tttcctcagt 2401 gtggagtcct atgctagaat ggagacctca cagcccagtt ttgagagttc ataagcacta 2461 gactcctccc agctctgcag acttttctta atacgggccc tttgctctga ccctttgttg 2521 gaacgggaaa taccccacag ccctaagttc agctgctatt ttaaacttgg ctcaccatat 2581 tgtccattta gtacttattg gcaatactgg ggttcttttt ctcagttctt tccgttgctg 2641 cattgccgcc ctctgcttct tcccacctag gtgctactat tctgtaggac ttgaggctag 2701 tcttagcttt tccacatctg ttgtattaca gtgttcaaag tgacactggt cacttgattt 2761 tattttttac ttttttgaga tagagtcttg ccctgttgcc caggctggag tgcagtggca 2821 tgatctcagc acactgcaac ctccacctcc caggttcaag tgattcccct gcctcagcct 2881 cccgagtagc tgtgattaat tacaggcacg tgccaccatg cctggccaat ttttatattt 2941 ttagtcaaga cagagtttca ctattttggc caggctagtc tcaaactcct gacctcaagt 3001 gatccaccca cctcagcctc ctaaagtgct ggtgtgtccg gaattggtgg gttcttggtc 3061 tcactgactt caagaatgaa gccgcggacc ctcgctgtga gtgttacagt tcttcaaggc 3121 ggcatgtccg gagtttcttc tttctgatgt tcggatgtgt ttggagtttc ttccttctgg 3181 tgggttcgtg gtctcgctgg ctcaggcgtg aagctgcaga ccttcgcggt gagcgttaca 3241 gctcttaagg cggcgcgtct ggagttgttc attcctcccg gtgggttcgt agtctcgctg 3301 gctccaggag tgaagctgcg atactgtttt ggaacatgta tgctgcgaat tcttccagcg 3361 ggtaagacgt gaccttttga ggtgactata actgaagatt gctttacaga agccaaaaaa 3421 ggtttttgag tcatgatgca agaatctggg actgagacaa aaagtaacgg ttcagccatc 3481 cagaatgggt cgggcggcag caaccactta ctagagtgcg gcggtcttcg ggaggggcgg 3541 tccaacggag agacgccggc cgtggacatc ggggcagctg acctcgccca cgcccagcag 3601 cagcagcaac aggcacttca ggtggcaaga cagctccttc ttcagcagca acagcagcag 3661 caagttagtg gattaaaatc tcccaagagg aatgacaaac aaccagctct tcaggttccc 3721 gtgtcagtgg ctatgatgac acctcaagtt atcactcccc agcaaatgca gcagatcctc 3781 cagcaacaag tgctgagccc tcagcagctc caggttctcc tccagcagca gcaggccctc 3841 atgcttcaac agcagcagct tcaagagttt tataaaaaac aacaggaaca gttgcagctt 3901 caacttttac aacaacaaca tgctggaaaa cagcctaaag agcaacagca ggtggctacc 3961 cagcagttgg cttttcagca gcagctttta cagatgcagc agttacagca gcagcacctc 4021 ctgtctttgc agcgccaagg ccttctgaca attcagcccg ggcagcctgc ccttcccctt 4081 caacctcttg ctcaaggcat gattccaaca gaactgcagc agctctggaa agaagtgaca 4141 agtgctcata ctgcagaaga aaccacaggc aacaatcaca gcagtttgga tctgaccacg 4201 acatgtgtct cctcctctgc accttccaag acctccttaa taatgaaccc acatgcctct 4261 accaatggac agctctcagt ccacactccc aaaagggaaa gtttgtccca tgaggagcac 4321 ccccatagcc atcctctcta tggacatggt gtatgcaagt ggccaggctg tgaagcagtg 4381 tgcgaagatt tccaatcatt tctaaaacat ctcaacagtg agcatgcgct ggacgataga 4441 agtacagccc aatgtagagt acaaatgcag gttgtacagc agttagagct acagcttgca 4501 aaagacaaag aacgcctgca agccatgatg acccacctgc atgtgaagtc tacagaaccc 4561 aaagccgccc ctcagccctt gaatctggta tcaagtgtca ctctctccaa gtccgcatcg 4621 gaggcttctc cacagagctt acctcatact ccaacgaccc caaccgcccc cctgactccc 4681 gtcacccaag gcccctctgt catcacaacc accagcatgc acacggtggg acccatccgc 4741 aggcggtact cagacaaata caacgtgccc atttcgtcag cagatattgc gcagaaccaa 4801 gaattttata agaacgcaga agttagacca ccatttacat atgcatcttt aattaggcag 4861 gccattctcg aatctccaga aaagcagcta acactaaatg agatctataa ctggttcaca 4921 cgaatgtttg cttacttccg acgcaacgcg gccacgtgga agaatgcagt gcgtcataat 4981 cttagtcttc acaagtgttt tgtgcgagta gaaaacgtta aaggggcagt atggacagtg 5041 gatgaagtag aattccaaaa acgaaggcca caaaagatca gtggggtgcc attcgcacca 5101 acctctcact gcataagtgc tttatcagag tagaggatga gtttgggtcc ttttggacag 5161 ttgatgatga agagtttaaa cgtggccgcc atattcaacg aggccgtcct cgcaaatact 5221 gccccgatga aaactttgac gagcttgtcg cacataaccc ttcccttatt aaaaacatgc 5281 agagcagcca cgcctactgc acacctctca atgcagcttt acaggcttca atggctgaga 5341 atagtatacc tctatacact accgcttcca tgggaaatcc cactctgggc aacttagcca 5401 gcgcaatacg ggaagagctg aacggggcaa tggagcatac caacagcaac gagagtgaca 5461 gcagtccagg cagatctcct atgcaagccg tgcatcctgt acacgtcaaa gaagagcccc 5521 tcgatccaga ggaagctgaa gggcccctgt ccttagtgac aacagccaac cacagtccag 5581 attttgacca tgacagagat tacgaagatg aaccagtaaa cgaggacatg gagtgactat 5641 cggggcgggc caaccccgag aatgaagatt ggaaaaagga aaaaaaaaaa aaaa //