LOCUS BC054505 5694 bp mRNA linear HTC 30-MAR-2005
DEFINITION Homo sapiens forkhead box P1, mRNA (cDNA clone IMAGE:5503553), with
apparent retained intron.
ACCESSION BC054505
VERSION BC054505.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5694)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5694)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: e Column: 3
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..5694
/db_xref="H-InvDB:HIT000259453_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5503553"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1374 a 1411 c 1197 g 1712 t
ORIGIN
1 tgcagcggtg tcccagaagc ttttgttgac aattccagtt tccgaacaaa acatttcggc
61 aatggtgagg gcttcgatcc cttctctgat ttgctgtcag ccatgaacgg atggatgtga
121 tgcctgctag ccaaaaggct tccctctgtg tgttgcagtc ctgtggcatt atgcatgccc
181 cctcccagtg accccaggct ttttatggct gtgagacacg ttaaaatttc aggacaggat
241 attgctgtgt tgcccaggct ggagcgccgt ggcacgatta tagctcactg taatttcgaa
301 ctcctgggct caagtgatcc tcccacctca gcctctgttg tagctgggac tacaggtatg
361 tgccaccatg cctggctaat gatttttaat ttttaattta atttaattta atttttttgt
421 agaggtgggg tctcactagg tttcccaggc tgatcttgaa ctcctggccc caagtgatcc
481 tcccaccttg gctgcccaaa gtgctaggat tacaagtgtg agccactcac tctttgcatt
541 attttttgat agttgtatta gatttgcatt ttcaggacat ttagccattt atatgatact
601 ctcccccttt taactctaac cctattgtac tttttagtaa tacaggtatg ttcagtgctc
661 agtaccagtt cttcagtgct tatgtcaatg tctgtagtca ttttgtctaa acttcatttc
721 tgttagattt tttggaaaag gctcatgggt actgtattcc ctgaattctt gaattttcgt
781 aacagtttgc tgtgttcttt atacttaaac cacaatcttt actgaattaa aaatgttgcc
841 tcacattttt tctttgcata tcttaaatat gttactcctt tttcttctgg cataataagt
901 cttaagtcca gtaattttat tagattatat cttagtgtcg gtcatttgga gcaaatatgc
961 ttcagtgtcc agggtccttt tgcaatatgt agtttcagaa tattttttta atttcaggaa
1021 tgtttctttg aattatagtt ttaggtattt ggacaatttt cttcctttgc tttcctctcc
1081 agggattcct actttttttt ctttcttctt ttagttttga gctttgtcac ccaggctgga
1141 gtacaatagc atgatcttgg ctcactgcaa cctgtgcctc ccaggttcaa acgattctca
1201 tgcctcagcc tcctgagtag ctgggactac aggcatgtgc caccatgcct ggctaatttt
1261 tgtcttttta gtagagacag aatttcacca tgttgaccag gctggtcttg aactcctggg
1321 ctcaagcagt cctcccacct tggcctcaca aagtggtggg ataacaggcg tgagccacca
1381 cacctgaccc agggattcct attttctata tgttggatct cctttacctg tcttcagtat
1441 tcgatacttt cccttaaatc cttctctctc tcttaatttc tgtttgattt tgtttttcat
1501 tttaaccttc tagttttttt taaagcgtta tttgttgtat ctatttgcta tctgtccctc
1561 tagtgtattt tcttatttct agaatgattt ttcttttttt caagtttatt ctttcttccc
1621 ccatttctca gccagtcgaa ttcttattta tgtaattctt ttttgtttat tttcttttgt
1681 tttgtttttt taagataggg tctcactctg tcattcaggc tgaagtgcag tggtgccatt
1741 tcagctcact gcaacctgtg cccccaggct caagcgatcc tcccacctca gcctcctaaa
1801 tagctgggat cacaggcacg caccaccaca cccagctatt tctttgtatt tttttgtggg
1861 gacagcgtct cgccatcttg ccctggctgg cttcaaactc gtgagtgcaa gtgatcctcc
1921 cacctcggcc tcccaaagtg ctgggattac aggtgtgagc cactgtacgt ggcttgattt
1981 atgtaattct ttcaggccgt atatcttatt cttaatgtct tttagctcat tttgaagtaa
2041 taggttacag acaagtaatt acatgtctga taaatgcttt cattttgtgt aagatgttat
2101 tctgttcctt ttttttatca ctttgtatag aattttacct caaaattttt atattgctca
2161 tttttacgtg aaagtgattt ttctgaactt ttagcagggt ggctgtatta agagagatct
2221 tctaattcct tagagctctc tctcttttgg gttactttct actacttggc tactggcatg
2281 ctttctaaaa tatctttact gtattcttct ctactttggg gaggcctttc tcttatcttt
2341 cctcttggtt ttctctgtcc tttttgattt tgattctgtt gccaggagtt tttcctcagt
2401 gtggagtcct atgctagaat ggagacctca cagcccagtt ttgagagttc ataagcacta
2461 gactcctccc agctctgcag acttttctta atacgggccc tttgctctga ccctttgttg
2521 gaacgggaaa taccccacag ccctaagttc agctgctatt ttaaacttgg ctcaccatat
2581 tgtccattta gtacttattg gcaatactgg ggttcttttt ctcagttctt tccgttgctg
2641 cattgccgcc ctctgcttct tcccacctag gtgctactat tctgtaggac ttgaggctag
2701 tcttagcttt tccacatctg ttgtattaca gtgttcaaag tgacactggt cacttgattt
2761 tattttttac ttttttgaga tagagtcttg ccctgttgcc caggctggag tgcagtggca
2821 tgatctcagc acactgcaac ctccacctcc caggttcaag tgattcccct gcctcagcct
2881 cccgagtagc tgtgattaat tacaggcacg tgccaccatg cctggccaat ttttatattt
2941 ttagtcaaga cagagtttca ctattttggc caggctagtc tcaaactcct gacctcaagt
3001 gatccaccca cctcagcctc ctaaagtgct ggtgtgtccg gaattggtgg gttcttggtc
3061 tcactgactt caagaatgaa gccgcggacc ctcgctgtga gtgttacagt tcttcaaggc
3121 ggcatgtccg gagtttcttc tttctgatgt tcggatgtgt ttggagtttc ttccttctgg
3181 tgggttcgtg gtctcgctgg ctcaggcgtg aagctgcaga ccttcgcggt gagcgttaca
3241 gctcttaagg cggcgcgtct ggagttgttc attcctcccg gtgggttcgt agtctcgctg
3301 gctccaggag tgaagctgcg atactgtttt ggaacatgta tgctgcgaat tcttccagcg
3361 ggtaagacgt gaccttttga ggtgactata actgaagatt gctttacaga agccaaaaaa
3421 ggtttttgag tcatgatgca agaatctggg actgagacaa aaagtaacgg ttcagccatc
3481 cagaatgggt cgggcggcag caaccactta ctagagtgcg gcggtcttcg ggaggggcgg
3541 tccaacggag agacgccggc cgtggacatc ggggcagctg acctcgccca cgcccagcag
3601 cagcagcaac aggcacttca ggtggcaaga cagctccttc ttcagcagca acagcagcag
3661 caagttagtg gattaaaatc tcccaagagg aatgacaaac aaccagctct tcaggttccc
3721 gtgtcagtgg ctatgatgac acctcaagtt atcactcccc agcaaatgca gcagatcctc
3781 cagcaacaag tgctgagccc tcagcagctc caggttctcc tccagcagca gcaggccctc
3841 atgcttcaac agcagcagct tcaagagttt tataaaaaac aacaggaaca gttgcagctt
3901 caacttttac aacaacaaca tgctggaaaa cagcctaaag agcaacagca ggtggctacc
3961 cagcagttgg cttttcagca gcagctttta cagatgcagc agttacagca gcagcacctc
4021 ctgtctttgc agcgccaagg ccttctgaca attcagcccg ggcagcctgc ccttcccctt
4081 caacctcttg ctcaaggcat gattccaaca gaactgcagc agctctggaa agaagtgaca
4141 agtgctcata ctgcagaaga aaccacaggc aacaatcaca gcagtttgga tctgaccacg
4201 acatgtgtct cctcctctgc accttccaag acctccttaa taatgaaccc acatgcctct
4261 accaatggac agctctcagt ccacactccc aaaagggaaa gtttgtccca tgaggagcac
4321 ccccatagcc atcctctcta tggacatggt gtatgcaagt ggccaggctg tgaagcagtg
4381 tgcgaagatt tccaatcatt tctaaaacat ctcaacagtg agcatgcgct ggacgataga
4441 agtacagccc aatgtagagt acaaatgcag gttgtacagc agttagagct acagcttgca
4501 aaagacaaag aacgcctgca agccatgatg acccacctgc atgtgaagtc tacagaaccc
4561 aaagccgccc ctcagccctt gaatctggta tcaagtgtca ctctctccaa gtccgcatcg
4621 gaggcttctc cacagagctt acctcatact ccaacgaccc caaccgcccc cctgactccc
4681 gtcacccaag gcccctctgt catcacaacc accagcatgc acacggtggg acccatccgc
4741 aggcggtact cagacaaata caacgtgccc atttcgtcag cagatattgc gcagaaccaa
4801 gaattttata agaacgcaga agttagacca ccatttacat atgcatcttt aattaggcag
4861 gccattctcg aatctccaga aaagcagcta acactaaatg agatctataa ctggttcaca
4921 cgaatgtttg cttacttccg acgcaacgcg gccacgtgga agaatgcagt gcgtcataat
4981 cttagtcttc acaagtgttt tgtgcgagta gaaaacgtta aaggggcagt atggacagtg
5041 gatgaagtag aattccaaaa acgaaggcca caaaagatca gtggggtgcc attcgcacca
5101 acctctcact gcataagtgc tttatcagag tagaggatga gtttgggtcc ttttggacag
5161 ttgatgatga agagtttaaa cgtggccgcc atattcaacg aggccgtcct cgcaaatact
5221 gccccgatga aaactttgac gagcttgtcg cacataaccc ttcccttatt aaaaacatgc
5281 agagcagcca cgcctactgc acacctctca atgcagcttt acaggcttca atggctgaga
5341 atagtatacc tctatacact accgcttcca tgggaaatcc cactctgggc aacttagcca
5401 gcgcaatacg ggaagagctg aacggggcaa tggagcatac caacagcaac gagagtgaca
5461 gcagtccagg cagatctcct atgcaagccg tgcatcctgt acacgtcaaa gaagagcccc
5521 tcgatccaga ggaagctgaa gggcccctgt ccttagtgac aacagccaac cacagtccag
5581 attttgacca tgacagagat tacgaagatg aaccagtaaa cgaggacatg gagtgactat
5641 cggggcgggc caaccccgag aatgaagatt ggaaaaagga aaaaaaaaaa aaaa
//