LOCUS BC054044 1018 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA
clone IMAGE:6166782), partial cds.
ACCESSION BC054044
VERSION BC054044.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912245.
FEATURES Location/Qualifiers
source 1..1018
/db_xref="H-InvDB:HIT000259417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6166782"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1018
/gene="CD3EAP"
/gene_synonym="ASE-1"
/gene_synonym="CAST"
/gene_synonym="PAF49"
/db_xref="GeneID:10849"
/db_xref="HGNC:HGNC:24219"
/db_xref="MIM:107325"
CDS 365..>1018
/gene="CD3EAP"
/gene_synonym="ASE-1"
/gene_synonym="CAST"
/gene_synonym="PAF49"
/codon_start=1
/product="CD3EAP protein"
/protein_id="AAH54044.1"
/db_xref="GeneID:10849"
/db_xref="HGNC:HGNC:24219"
/db_xref="MIM:107325"
/translation="MEEPQAGDAARFSCPPNFTAKPPASESPRFSLEALTGPDTELWL
IQAPADFAPECFNGRHVPLSGSQIVKGKLAGKRHRYRVLSSCPQAGEATLLAPSTEAG
GGLTCASAPQGTLRILEGPQQSLSGSPLQPIPASPPPQIPPGLRPRFCAFGGNPPVTG
PRSALAPNLLTSGKKKKEMQVTEAPVTQEAVNGHGALEVDMALGSPEMDVRKKKKKKK
"
BASE COUNT 213 a 317 c 292 g 196 t
ORIGIN
1 ctttaaggct taggaagagc agtgtggctg cccctttaag gaggcgttgc aacaaaccat
61 attggacaga cgatgggggc gacccatcgg gacccgacgg gcctctgact ccagcaatac
121 agcgaatcag cggctttcgg gaatacattt ttcggaaaaa gacttcttcc tcggttttct
181 gctctgcaca cgttgaaatt ttccccagtt tttcctgcag atcgggagtc gagcaatgcc
241 tacccccgcg ctcccgcacc agttgggcgc tcccggatga tgccctaccc ctttggatcc
301 acgtggtctg caacctggtg cgagcagccc gggctacagg gttgcctgag gtgtgggtcc
361 caggatggag gagccccagg ccggcgatgc tgctcggttc tcttgtcccc ccaactttac
421 cgcgaagccc ccagcctcag agtcccctcg tttctccttg gaggcgctga cgggtccaga
481 tacggagctg tggcttattc aggcccctgc agactttgcc ccagaatgct tcaatgggcg
541 gcatgtgcct ctctctggct cccagatcgt caagggcaaa ttggcaggca agcggcaccg
601 ctatcgagtc ctcagcagct gtccccaagc tggagaagcg accctgctgg ccccctcaac
661 ggaggcagga ggtggactca cctgtgcctc agccccccag ggcaccctaa ggatccttga
721 gggtccccag caatccctgt cagggagccc tctgcagccc atcccagcaa gtcccccacc
781 acagatccct cctggcctga ggcctcggtt ctgtgccttt gggggcaacc caccagtcac
841 agggcctagg tcagccttgg cccccaacct gctcacctca gggaagaaga aaaaggagat
901 gcaggtgaca gaggccccag tcactcagga ggcagtgaat gggcacgggg ccctggaggt
961 ggacatggct ttggggtcgc cagaaatgga tgtgcggaag aagaaaaaaa aaaaaaaa
//