LOCUS BC054032 1223 bp mRNA linear HUM 10-APR-2007
DEFINITION Homo sapiens chromosome X open reading frame 57, mRNA (cDNA clone
IMAGE:6526714), partial cds.
ACCESSION BC054032
VERSION BC054032.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC054032.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46195791.
FEATURES Location/Qualifiers
source 1..1223
/db_xref="H-InvDB:HIT000259409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6526714"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1223
/gene="CXorf57"
/gene_synonym="RP11-647M7.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
CDS 424..>1223
/gene="CXorf57"
/gene_synonym="RP11-647M7.1"
/codon_start=1
/product="CXorf57 protein"
/protein_id="AAH54032.1"
/db_xref="GeneID:55086"
/db_xref="HGNC:HGNC:25486"
/translation="MRISRVSCLYNEKRIGQGILCIDNVHCGETSDSISLETPFRNRA
HQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEEHNFSDTKIISLSHLEMTWTN
RRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSVIMWNALCPEWYK
SLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRDPPTNIIIIPEKQ
VKPEWRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKKKK"
BASE COUNT 355 a 267 c 299 g 302 t
ORIGIN
1 cccacgcgtc cggtgaagcg ggtacgcagt tatccaacaa tgtctggtga gtcaggacag
61 cctgaggctg gtccctcaca tgcagggcta gattggccga accctgagag gaatcgggct
121 ggggtcccgg gaggggtgat ccgaagagct ggttcccaag ggcccaggtc ctggatccaa
181 aaggttcttg agcagattat ggactcacct cgccagtgtg tcaccccctc ggaggtggtg
241 cctgtaactg tgctggccgt ccagaggtac ctgttagagg atgagccacg cgacacggtg
301 cccaagcctc ccctttattg ctatgatgtg acgatctcag atggggtgta ccaggagaag
361 tgctacctgg accccagctt gaactctctc gtatatcaaa atattcttaa agttggcatt
421 caaatgagaa tttccagggt ctcatgtctt tacaatgaga aaaggatagg ccaggggatc
481 ctgtgcatag ataacgtcca ctgtggggag acttcagaca gtatttcttt agaaactccc
541 ttcagaaata gagcgcacca ggagaaacca gagaggcctt taagaggcgg gaagagtcat
601 tacctggcgc tgtggaataa cgaagatccc tatggagata tctggttaac agacaagcaa
661 cctgaggaac acaactttag cgataccaaa ataatttccc tttctcatct tgaaatgacc
721 tggactaaca gaagaaattt tcctgcattg cttgtgagga tcttacataa atcaaaactg
781 cgatactatg gaaaacctga taaaaagatg attgaaccat atcagacctt tttggaagtt
841 gctgacagtt caggcacagt gtcagtgatt atgtggaatg ccctgtgtcc tgagtggtat
901 aaaagtttgc gggttggttt agttcttctg cttcaagact attctgttaa aaagagttat
961 ccattcagaa tacagcctgt ccccgtggat ccacagatca aactaatttc tacaatggaa
1021 atctgcctga atcttcgaga tcccccaaca aatataatta tcattccaga aaagcaggtg
1081 aaaccagaat ggagactgcc aaagctaaat caccgattta ccacaaggtc agaactggat
1141 gatatgccag aaaattgcat ctgtgatgtt attggccttt tagtttttgt aggaagggtc
1201 cagcggtcaa aaaaaaaaaa aaa
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