LOCUS BC054030 1584 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 53, mRNA (cDNA clone MGC:64882
IMAGE:6145598), complete cds.
ACCESSION BC054030
VERSION BC054030.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1584)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1584)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32699063.
FEATURES Location/Qualifiers
source 1..1584
/db_xref="H-InvDB:HIT000054053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64882 IMAGE:6145598"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1584
/gene="WDR53"
/gene_synonym="MGC64882"
/db_xref="GeneID:348793"
/db_xref="HGNC:HGNC:28786"
CDS 472..1548
/gene="WDR53"
/gene_synonym="MGC64882"
/codon_start=1
/product="WD repeat domain 53"
/protein_id="AAH54030.1"
/db_xref="GeneID:348793"
/db_xref="HGNC:HGNC:28786"
/translation="MAVKWTGGHSSPVLCLNASKEGLLASGAEGGDLTAWGEDGTPLG
HTRFQGADDVTSVLFSPSCPTKLYASHGETISVLDVRSLKDSLDHFHVNEEEINCLSL
NQTENLLASADDSGAIKILDLENKKVIRSLKRHSNICSSVAFRPQRPQSLVSCGLDMQ
VMLWSLQKARPLWITNLQEDETEEMEGPQSPGQLLNPALAHSISVASCGNIFSCGAED
GKVRIFRVMGVKCEQELGFKGHTSGVSQVCFLPESYLLLTGGNDGKITLWDANSEVEK
KQKSPTKRTHRKKPKRGTCTKQGGNTNASVTDEEEHGNILPKLNIEHGEKVNWLLGTK
IKGHQNILVADQTSCISVYPLNEF"
BASE COUNT 465 a 334 c 392 g 393 t
ORIGIN
1 cgaggagggg agcgggaagc gcagtgccag cgccacagcc cttcaatcat tttggttgct
61 atccagcttc tccacatcaa gtccaacttc agaaacccca agcctgtaga gaaaagttga
121 cctgtgctga ctctggtgat ggtgactgtc tctcactaat ttctttgaag tcttcaagga
181 taagcagagt tgatccatct gagaaaggga tcatgaacta gacagaatga acagccttag
241 aggcacagac tcttgaacgg gacggtggtg gtatgactag tgcagagtgt ttagagatca
301 ctcagttttt aaagactggc ctttatcgtg tctcagtgca gccgaggcag agcctttgaa
361 ggatgcgatg ttgtcattct tactaatcta gtccagccgc tgaggtgact ttcaacggca
421 gaccgtctcc tgagcgcccc aggtagaatt tcaaaagtct ccgggaccat tatggcagtc
481 aagtggacgg gtgggcattc ttctcctgtc ctctgcctga atgcaagtaa agaagggctg
541 ctggcttctg gagcagaggg cggagatctc acggcttggg gtgaagatgg aactccatta
601 ggacacacgc ggttccaagg ggctgatgat gttaccagtg tcttattttc tccctcctgt
661 cccaccaagc tctatgcctc acatggagaa accattagtg tactggatgt caggtccctc
721 aaagattcct tggaccattt tcatgtgaat gaagaagaaa tcaattgtct ttcattgaat
781 caaacggaaa acctgctggc ttctgctgac gactctgggg caatcaaaat cctagacttg
841 gaaaacaaga aagttatcag atccttgaag agacattcca atatctgctc ctcagtggct
901 tttcggcctc agaggcctca gagcctggtg tcatgtggac tggatatgca ggtgatgctg
961 tggagtcttc aaaaagcccg accactctgg attacaaatt tacaggagga tgaaacagaa
1021 gaaatggaag gcccacagtc acctggtcag ctcttaaacc ctgccctagc ccattctatc
1081 tctgtggctt cgtgtggtaa tatttttagt tgtggtgcag aagatggtaa ggttcgaatc
1141 tttcgggtga tgggagttaa gtgtgaacag gaactgggat ttaagggcca cacttcaggg
1201 gtatcccagg tctgctttct cccagaatcc tatttgctgc ttactggagg gaatgatggg
1261 aagatcacgt tgtgggatgc aaacagtgaa gttgagaaaa aacagaagag tcccacaaaa
1321 cgtacccaca ggaagaaacc taaaagagga acttgcacca agcagggtgg aaatactaac
1381 gcttcagtaa cagatgagga agaacatggc aacattttac caaagctaaa tattgaacat
1441 ggagaaaaag tgaactggct cttgggtaca aaaataaagg gacaccaaaa tatattagta
1501 gctgatcaaa ctagttgtat atctgtatac cccttaaatg aattttaaat ccaataaaaa
1561 catttgaaga aaaaaaaaaa aaaa
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