LOCUS BC054004 3715 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens septin 9, mRNA (cDNA clone MGC:61648 IMAGE:6146448),
complete cds.
ACCESSION BC054004
VERSION BC054004.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3715)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3715)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..3715
/db_xref="H-InvDB:HIT000054044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61648 IMAGE:6146448"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3715
/gene="SEPT9"
/gene_synonym="AF17q25"
/gene_synonym="KIAA0991"
/gene_synonym="MSF"
/gene_synonym="MSF1"
/gene_synonym="PNUTL4"
/gene_synonym="SINT1"
/db_xref="GeneID:10801"
/db_xref="MIM:604061"
CDS 449..1717
/gene="SEPT9"
/gene_synonym="AF17q25"
/gene_synonym="KIAA0991"
/gene_synonym="MSF"
/gene_synonym="MSF1"
/gene_synonym="PNUTL4"
/gene_synonym="SINT1"
/codon_start=1
/product="SEPT9 protein"
/protein_id="AAH54004.1"
/db_xref="GeneID:10801"
/db_xref="MIM:604061"
/translation="MEPPASKVPEVPTAPATDAAPKRVEIQMPKPAEAPTAPSPAQTL
ENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDAGLKQAPA
SRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKIS
RKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKF
INDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIV
PVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFA
VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIH
FEAYRVKRLNEGSSAMANGVEEKEPEAPEM"
BASE COUNT 842 a 1157 c 1062 g 654 t
ORIGIN
1 ctgggagcgg cggccacgga ggcaccatga agaagtctta ctcaggaggc acgcggacct
61 ccagtggccg gctccggagg cttggtgact ccagtggccc agccttgaaa agatcttttg
121 aggtcgagga ggtcgagaca cccaactcca ccccaccccg gagggtccag actcccctac
181 tccgagccac tgtggccagc tccacccaga aattccagga cctgggcatg aagaactcag
241 aaccctcggc ccgccatgtg gactccctaa gccaacgctc ccccaaggcg tccctgcgga
301 gggtggagct ctcgggcccc aaggcggccg agccggtgtc ccggcgcact gagctgtcca
361 ttgacatctc gtccaagcag gtggagaacc ggcccctcgg aggacggaga tcaccatcgt
421 caaaccccag gagtcagccc accggaggat ggagccccct gcctccaagg tccccgaggt
481 gcccactgcc cctgccaccg acgcagcccc caagagggtg gagatccaga tgcccaagcc
541 tgctgaggcg cccaccgccc ccagcccagc ccagaccttg gagaattcag agcctgcccc
601 tgtgtctcag ctgcagagca ggctggagcc caagccccag ccccctgtgg ctgaggctac
661 accccggagc caggaggcca ctgaggcggc tcccagctgc gttggcgaca tggccgacac
721 ccccagagat gccgggctca agcaggcgcc tgcatcacgg aacgagaagg ccccggtgga
781 cttcggctac gtggggattg actccatcct ggagcagatg cgccggaagg ccatgaagca
841 gggcttcgag ttcaacatca tggtggtcgg gcagagcggc ttgggtaaat ccaccttaat
901 caacaccctc ttcaaatcca aaatcagccg gaagtcggtg cagcccacct cagaggagcg
961 catccccaag accatcgaga tcaagtccat cacgcacgat attgaggaga aaggcgtccg
1021 gatgaagctg acagtgattg acacaccagg gttcggggac cacatcaaca acgagaactg
1081 ctggcagccc atcatgaagt tcatcaatga ccagtacgag aaatacctgc aggaggaggt
1141 caacatcaac cgcaagaagc gcatcccgga cacccgcgtc cactgctgcc tctacttcat
1201 ccccgccacc ggccactccc tcaggcccct ggacatcgag tttatgaaac gcctgagcaa
1261 ggtggtcaac atcgtccctg tcatcgccaa ggcggacaca ctcaccctgg aggagagggt
1321 ccacttcaaa cagcggatca ccgcagacct gctgtccaac ggcatcgacg tgtaccccca
1381 gaaggaattt gatgaggact cggaggaccg gctggtgaac gagaagttcc gggagatgat
1441 cccatttgct gtggtgggca gtgaccacga gtaccaggtc aacggcaaga ggatccttgg
1501 gaggaagacc aagtggggta ccatcgaagt tgaaaacacc acacactgtg agtttgccta
1561 cctgcgggac cttctcatca ggacgcacat gcagaacatc aaggacatca ccagcagcat
1621 ccacttcgag gcgtaccgtg tgaagcgcct caacgagggc agcagcgcca tggccaacgg
1681 cgtggaggag aaggagccag aagccccgga gatgtagacg ccaccctgcc cacccccggg
1741 atcctgcccc caagtcattt ccgtcccccc cccaggccct cccaccaccc cattttattt
1801 tatatgattt tctccatttg tcatcgttcc ccaccccttc gacatgctgc caggaaacaa
1861 gggaaggggc ctccctccga gtgagtcagt gatgaggccg cggcctcccc gaggttgtgg
1921 ggaggctgca ctggagccac aggcaggggt gagagcaccc actgaattga catgaccctc
1981 tgtccccagg cctggctccc cgagggctca gaagagcagc ttcggtgtgc agatcatccg
2041 tctgtgtggg gttctcagtg ccggaggcct tggggtgggg gccaggcctc gcacttgcag
2101 aggagcccag tgggctgcac gctcccctcc atccccatcg gccctgtccc ctggagtgtg
2161 tcagagccca ggggagaatg cagcccacca ggagcacctg gaccccctgc ccgccacatg
2221 gtgtggccat cactcagccc ctacccctgc cctgctccta agggtagaaa actccagggt
2281 cccctgccac cgactgccca gccactccaa gccccctggc agctgcccct cctggagcag
2341 aaagtgcctt tatctcagcc atccgcagac tgcttggcca gatgcgggga caggctggaa
2401 tgagggaggc gtcttcatct ccctgccatc cccctctcac gccacccccg cccccaccgg
2461 gctgcaggtg ctgctgatgc gctgggatct gattgaggat aaaaaggaag gagagatgac
2521 ccctaccccc tcatccccca gttttgaaaa ggtctaagca agtgagtctg gtggaggagc
2581 tgagggaggg agccatggaa ggtgccagaa ggaaggttgg cgggggcacg tgtgggccgt
2641 ggcttgggct ggtcagagtg gcgtgagctg cccggcgcct gccctgccca agtgaccagg
2701 gaagtgtgtg tgtgtccatg tgtatgcgtg tccgtctgtc tgtctagtgt ctgggtttgg
2761 cccaagactg ggctgtagtt acattaatgc ccagccagcc acccctgcca ctcacccctc
2821 ctggcccagg ccttgctgac tctctgagct ggggaggtgg gaggccaggc gagcctgact
2881 ctgttgatct acccgtgcct gggcccctcc cctcagagcc catggtaacg aacccctaga
2941 aaggagagaa cgggcgtcag gggtgcacag tccacagctg aagagcaagg tttcgtggca
3001 gcacggcccg gcccctcacc ctctgtcccc acgaggggac ccatgggggc tgtctttgca
3061 gggcacagat gaccaaagtc ccttcctgct tcctgttacc tgtcttgctc ctggggagaa
3121 agaggggcct gatgagactc cactcaggtg cacacatcac caggtgcatc tgcaggcacc
3181 gggctggctg cttgcagcca ggagaaggtc agcgagaagg agtgtatgag tgtgagtgtg
3241 tgtgcatgga agttggggca ctgggcgtct gactccctcc ccacccaaga gaggaaggac
3301 ccctcaccac ccccactggc gagacagttt actttgccga cttgccatgt ttttgccaaa
3361 accaagattt tgaaggaaat gagtggccag cgccagggcc caggccatgt ggcctgccca
3421 gcctcaatgt cacttggcgg cggggtgggg tgggggtggg cagcagcatc ccagccttga
3481 gatgcttcac tttccttctc tgtaaccaga ctttgaaaaa ttgttcgttt catcaggctc
3541 tgttcctcaa tggccttttg ctacgtgcct cccgagaaat ttgtcttttt gtataaatga
3601 caaagtgttg aaaatgtatt tcctgaaata aatgtttcaa atgcagaaac ccaaaaaaaa
3661 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//