LOCUS BC054002 3825 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 177, mRNA (cDNA clone
MGC:61749 IMAGE:6066745), complete cds.
ACCESSION BC054002
VERSION BC054002.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698751.
FEATURES Location/Qualifiers
source 1..3825
/db_xref="H-InvDB:HIT000054042"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61749 IMAGE:6066745"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3825
/gene="C20orf177"
/gene_synonym="dJ551D2.5"
/db_xref="GeneID:63939"
/db_xref="HGNC:HGNC:16170"
CDS 238..1389
/gene="C20orf177"
/gene_synonym="dJ551D2.5"
/codon_start=1
/product="chromosome 20 open reading frame 177"
/protein_id="AAH54002.1"
/db_xref="GeneID:63939"
/db_xref="HGNC:HGNC:16170"
/translation="MNAGPSWNKVQHSKNSSGKRQSKSQVPHASSQPRSSLTAVTQPT
EEKLKESISPEARRKRNPLGSRCQGASGNKLFLDFQSMKIIKENADEDSASDLSDSER
IPIPPSPLTPPDLNLRAEEIDPVYFDLHPGQGHTKPEYYYPNFLPSPFSSWDLRDMAL
LLNAENKTEAVPRVGGLLGKYIDRLIQLEWLQVQTVQCEKAKGGKARPPTAPGTSGAL
KSPGRSKLIASALSKPLPHQEGASKSGPSRKKAFHHEEIHPSHYAFETSPRPIDVLGG
TRFCSQRQTLEMRTEEKKKKSSKSTKLQRWDLSGSGSSSKVETSGHIRVPKQAAVILD
SADSCKASKTQAHAHPRKKGKAESCGHATVSSEKKLKTNGVKQNTYKLK"
BASE COUNT 1134 a 775 c 803 g 1113 t
ORIGIN
1 agcctcgtca cgtgtccgct gcagtcgcga aacagttccg gtggtgagga gacctttcca
61 aatataagag gaataaagaa gtcacctccc cagctgtcat catcttccag cagattgagc
121 aagaatattt tgagcactac aggaaagaca gtccatcaaa cccgagatga tgatcagcca
181 cgtgattttt tcaagaagag gaatagggtg aatgaatctc atcagaaaag cagcaatatg
241 aatgctggcc catcttggaa taaagtgcaa cattcaaaga attcttcagg aaaaaggcag
301 agtaaatccc aagtacccca cgcttcttcc cagccgagaa gcagcctcac agctgtcacc
361 cagcctactg aagaaaaact taaagaaagc atttccccgg aagcaagacg caaaaggaat
421 ccactcggtt ccaggtgtca gggggcctca gggaataaac tgtttcttga ttttcagtca
481 atgaaaatta ttaaagagaa tgctgatgag gacagtgcaa gtgatctctc tgattcggaa
541 agaattccca ttcctccttc tcccctcaca cctccagatc tcaatcttcg agctgaagaa
601 attgatccag tttactttga tcttcaccct ggtcagggcc atacaaaacc tgaatactat
661 tatcctaatt tccttccatc ccctttcagc tcctgggacc tacgagatat ggccctgctt
721 ctgaacgcag agaacaaaac ggaagccgtg ccccgagtgg gaggacttct tgggaagtat
781 atcgatagac ttattcagct tgagtggctg caagtccaga ctgtacagtg tgaaaaagca
841 aaggggggca aagcaaggcc ccccactgcc cctgggacct caggggcact gaaaagccct
901 gggagaagta agctaattgc tagtgctctg tccaagccac tacctcacca ggaaggggct
961 tcaaagtcag gcccttcccg aaagaaagct tttcaccatg aagaaatcca cccatcacat
1021 tatgcatttg agacttcccc tagacccatt gatgtgcttg gtggtaccag gttttgttct
1081 cagaggcaaa cccttgaaat gaggacagaa gaaaagaaaa agaaatcaag taagagtacg
1141 aagctgcagc gctgggatct gtccggcagt ggaagcagct ctaaggtgga aaccagcggt
1201 cacattcgag ttcccaaaca ggcagctgtg attctggact cagcagattc ctgtaaggcc
1261 tccaaaacac aagcacatgc acatcctagg aaaaagggaa aggcagagag ctgtggtcat
1321 gccactgtat cgagtgagaa aaaactgaaa acaaacggag taaagcaaaa cacatataaa
1381 ctaaaataaa tatctaaaat gctgaattgc caagacctgc aggtacctca atgttagagc
1441 gcttccaaaa gtcaaaatac tgtgaatttt aaggaatttt acaaatactg acatttaagt
1501 agttgactgg catttttgtc cacctttatt tctaccctga gtggggttat tttcaaaggg
1561 aagtgtcttt caataagcct ttctttgtat tgtcagtctt aggcaaatga gagcccttta
1621 gataaaaatt atgtaaaata tgtgccatat aaaggaataa aatggcacct ctccagggaa
1681 agtgtcagtg aaacctcagc tacagtagcc ggtctgtgta gagcagctag tggtgttacc
1741 tccccatttt cacatgcacg taagtatatg aaatagtgca gactgtttca aatggtgtgg
1801 aatcctaaat gtttaaaata aggtccttct tgcccactcc ctcgcttact tttttataaa
1861 ctcctcaagc aaaatttctg ttcattttac ccttaggaga agctttagtt cttcctcaag
1921 tcagggagta gtgagtttgt attttgagta gtcatttctc actaagctgg ttgctttcta
1981 gagagacagt ggaatctagt actttaatac attttctctg acatggtttt ttttttcttt
2041 tttgaggggc attttaaact tagaggtggt ggtaaaacct acttttgagt tctccgaact
2101 gaggttaaaa taacttgcag aattttccaa agtcaatggg cttagcatga ttactgctgt
2161 ttggtggggc tgagaatgaa atatttgaca ttctggaatt gctggcatgt aaagcttctc
2221 cagagaggca ccccagggaa atcactcttt acaatttgta aaggaagggc ctgtaaaagg
2281 atcaaaacac atggacctac attcagtgta atagttacaa agttactgat ttgggttcca
2341 caccctgtgg tccttagtca aaaataatga tctgtttcag tttgcaagag caggatttta
2401 ttattttgct tggggtgagg ggcgggagag tggaatatga gtaaggttgc tgaatgaatt
2461 ctaaactcgc ttatctggtc ttcaggcttc ccaactctct ccaagccttc ttatttcact
2521 gcagttaaat aacatcttct tgttcctata gttgtgctgt gagttttctg ttcatatttg
2581 cgcagtgtat tttaatacgg cccatgtcat tatagttgat tttatccctt taaacaatta
2641 ctgtatttgt ttttgacgta gaggtttcaa ttttttcacc ttgggggcaa atgaaaaact
2701 tggcattttt catttgggaa catataatag cttgtaaact tttcagacag cagtaaatgt
2761 ctgaaaaaat atcaaaaaca gcataaagac aagattatgt agctctaatt atacgtatat
2821 aattataaaa aacaatgtgc aagggttata ttttaaggtc ttttaaaatc tgattttgat
2881 cataccaaat gacataatat tttttatggt agccttttac tttcaagact taattttcag
2941 acttgtacaa gttccttctt acattctttc cctctcacac catcctactg gagaaagcat
3001 acttttatgc taagatctta ctttaagctt tttatgtgaa caaaagatgt acatatagta
3061 agtattactt ccgtagtcct caaatttact ataacttttg tacttagtat atgttttata
3121 tttggaaaac agcactacgc ttagttttcc tgtagttcct gagtgatgtc tgtgtgttcc
3181 ttgcctgccc ttttttgtga gcacagatta gtctgttatc catggctggc acttcactta
3241 tgatcctttc tctgctagat ttttatgcag ctctctatga agtttcatgg cccatagata
3301 ttcaaaagca agatattcta tacatatgtg tatatgtata tatactcctt atgttaatac
3361 taaagtgttt atgctgagtt gctgcctttc cccgtcatgt atccatgtgc atgctcttag
3421 agaccttgaa tggttgaggg taaagtgatt tattagtaat tctacttgcc ttgtgtatgt
3481 ctgagctgaa aacaatcgtg attaagaaat ttagaggtgg ctgggcgtgg tggctcacgc
3541 ctgtaatccc agcactttgg gaggccgagg caggcggatc acctgaggtc gggagttcaa
3601 gaccagcctg accaacatgg agaaaccctg tctccactaa aaatacaaaa ttagccgggt
3661 gtggtggtgc atgcctgtaa tcccagctac tcggaagttt gagacgagaa tctcttgaac
3721 ccgggaggcg gaggttgtgg tgagccaaga tcgtgccatt gcactccagc ctgggcaaca
3781 agagggaaac tccgtttcaa aaaaaaaaaa aaaaaaaaaa aaaaa
//