LOCUS BC053997 1058 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens FSHD region gene 1, mRNA (cDNA clone MGC:61487 IMAGE:5555121), complete cds. ACCESSION BC053997 VERSION BC053997.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1058) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1058) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: f Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4758403. FEATURES Location/Qualifiers source 1..1058 /db_xref="H-InvDB:HIT000054037" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61487 IMAGE:5555121" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1058 /gene="FRG1" /gene_synonym="FSG1" /db_xref="GeneID:2483" /db_xref="HGNC:HGNC:3954" /db_xref="MIM:601278" CDS 149..925 /gene="FRG1" /gene_synonym="FSG1" /codon_start=1 /product="FSHD region gene 1" /protein_id="AAH53997.1" /db_xref="GeneID:2483" /db_xref="HGNC:HGNC:3954" /db_xref="MIM:601278" /translation="MAEYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIV GIWWTVTNFGEISGTIAIEMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKL SDSRIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCN EAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQD HKLKISKEDSKILKKARKDGFLHETLLDRRAKLKADRYCK" BASE COUNT 406 a 185 c 236 g 231 t ORIGIN 1 ggacggaggc gggttctaca gagacgtagg ctgtcaggga gtgtttattt cgcgtccgct 61 tctgtttctc cgcgcccctg tgctgccccg actcacatac tcgtccagaa ccggcctcag 121 cctctccgcg cagaagtttc ccggagccat ggccgagtac tcctacgtga agtctaccaa 181 gctcgtgctc aagggaacca agacgaagag taagaagaaa aagagcaaag ataagaaaag 241 aaaaagagaa gaagatgaag aaacccagct tgatattgtt ggaatctggt ggacagtaac 301 aaactttggt gaaatttcag gaaccatagc cattgaaatg gataagggaa cctatataca 361 tgcactcgac aatggtcttt ttaccctggg agctccacac aaagaagttg atgagggccc 421 tagtcctcca gagcagttta cggctgtcaa attatctgat tccagaatcg ccctgaagtc 481 tggctatgga aaatatcttg gtataaattc agatggactt gttgttgggc gttcagatgc 541 aattggacca agagaacaat gggaaccagt ctttcaaaat gggaaaatgg ctttgttggc 601 ctcaaatagc tgctttatta gatgcaatga agcaggggac atagaagcaa aaagtaaaac 661 agcaggagaa gaagaaatga tcaagattag atcctgtgct gaaagagaaa ccaagaaaaa 721 agatgacatt ccagaagaag acaaaggaaa tgtaaaacaa tgtgaaatca attatgtaaa 781 gaaatttcag agcttccaag accacaaact taaaataagt aaagaagaca gtaaaattct 841 taaaaaggct cggaaagatg gatttttgca tgagacgctt ctggacagga gagccaaatt 901 gaaagccgac agatactgca agtgactggg atttttgttt ctgccttatc tttctgtgtt 961 tttttctgaa taaaatattc agaggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //