LOCUS BC053997 1058 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FSHD region gene 1, mRNA (cDNA clone MGC:61487
IMAGE:5555121), complete cds.
ACCESSION BC053997
VERSION BC053997.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1058)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758403.
FEATURES Location/Qualifiers
source 1..1058
/db_xref="H-InvDB:HIT000054037"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61487 IMAGE:5555121"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1058
/gene="FRG1"
/gene_synonym="FSG1"
/db_xref="GeneID:2483"
/db_xref="HGNC:HGNC:3954"
/db_xref="MIM:601278"
CDS 149..925
/gene="FRG1"
/gene_synonym="FSG1"
/codon_start=1
/product="FSHD region gene 1"
/protein_id="AAH53997.1"
/db_xref="GeneID:2483"
/db_xref="HGNC:HGNC:3954"
/db_xref="MIM:601278"
/translation="MAEYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIV
GIWWTVTNFGEISGTIAIEMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKL
SDSRIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCN
EAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQD
HKLKISKEDSKILKKARKDGFLHETLLDRRAKLKADRYCK"
BASE COUNT 406 a 185 c 236 g 231 t
ORIGIN
1 ggacggaggc gggttctaca gagacgtagg ctgtcaggga gtgtttattt cgcgtccgct
61 tctgtttctc cgcgcccctg tgctgccccg actcacatac tcgtccagaa ccggcctcag
121 cctctccgcg cagaagtttc ccggagccat ggccgagtac tcctacgtga agtctaccaa
181 gctcgtgctc aagggaacca agacgaagag taagaagaaa aagagcaaag ataagaaaag
241 aaaaagagaa gaagatgaag aaacccagct tgatattgtt ggaatctggt ggacagtaac
301 aaactttggt gaaatttcag gaaccatagc cattgaaatg gataagggaa cctatataca
361 tgcactcgac aatggtcttt ttaccctggg agctccacac aaagaagttg atgagggccc
421 tagtcctcca gagcagttta cggctgtcaa attatctgat tccagaatcg ccctgaagtc
481 tggctatgga aaatatcttg gtataaattc agatggactt gttgttgggc gttcagatgc
541 aattggacca agagaacaat gggaaccagt ctttcaaaat gggaaaatgg ctttgttggc
601 ctcaaatagc tgctttatta gatgcaatga agcaggggac atagaagcaa aaagtaaaac
661 agcaggagaa gaagaaatga tcaagattag atcctgtgct gaaagagaaa ccaagaaaaa
721 agatgacatt ccagaagaag acaaaggaaa tgtaaaacaa tgtgaaatca attatgtaaa
781 gaaatttcag agcttccaag accacaaact taaaataagt aaagaagaca gtaaaattct
841 taaaaaggct cggaaagatg gatttttgca tgagacgctt ctggacagga gagccaaatt
901 gaaagccgac agatactgca agtgactggg atttttgttt ctgccttatc tttctgtgtt
961 tttttctgaa taaaatattc agaggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//