LOCUS       BC053890                2259 bp    mRNA    linear   HUM 30-JUN-2004
DEFINITION  Homo sapiens chromodomain helicase DNA binding protein 7, mRNA
            (cDNA clone IMAGE:6148161), partial cds.
ACCESSION   BC053890
VERSION     BC053890.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 115 Row: l Column: 10
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, GenomeScan gene prediction.
FEATURES             Location/Qualifiers
     source          1..2259
                     /db_xref="H-InvDB:HIT000259364"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6148161"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_72"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..>2259
                     /gene="CHD7"
                     /gene_synonym="FLJ20357"
                     /gene_synonym="FLJ20361"
                     /gene_synonym="KIAA1416"
                     /db_xref="GeneID:55636"
     CDS             476..>2259
                     /gene="CHD7"
                     /gene_synonym="FLJ20357"
                     /gene_synonym="FLJ20361"
                     /gene_synonym="KIAA1416"
                     /codon_start=1
                     /product="CHD7 protein"
                     /protein_id="AAH53890.1"
                     /db_xref="GeneID:55636"
                     /translation="MSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASL
                     QPSLHHPSTNQNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNTPGNGLASPHSQYHTP
                     PVPQVPHGGSGGGQMGVYPGMQNERHGQSFVDSSSMWGPRAVQVPDQIRAPYQQQQPQ
                     PQPPQPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQGN
                     PFIATSGPGHLSHVPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSPNPPQQ
                     GAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPM
                     NQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSP
                     MKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQ
                     QSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQLPTC
                     PPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQ
                     VSGPNAQLVKSDDYLPSIEQQPQQKKKK"
BASE COUNT          593 a          674 c          545 g          447 t
ORIGIN      
        1 ggcggcggcg gcgcgggggt tgagtcgtgg tggtgcggac gcgctcgtgc tcgggaacta
       61 tcggattaaa cttgaatcga gtgaaattac acaaaggagc gccgcggagg aggcggcccg
      121 gggacccgga caccctgaaa ctcaccagag acccgttcgc ccccggccaa ctccgtgccc
      181 gtggattcag ccccctggcc gcagctgccg agccaactcc ggagcccgct ctgcgttttg
      241 ttttcccctc ggcactaggc agcggaggag cccgaccgac ccggacctat atccagactt
      301 tgcctgacac tgcagggtcc aagagaatta aagaaatatg gaatgacatg aagaagatta
      361 gttaaggatt ataggctttg agggcaaaca cctcagtgaa gtgaagcaca ggcaagctcc
      421 tgagctgtgg tttggaggag ccgtgtgttg gaagaagatg gcagatccag gaatgatgag
      481 tctttttggc gaggatggga atattttcag tgaaggtctt gaaggcctcg gagaatgtgg
      541 ttacccggaa aatccagtaa atcctatggg tcagcaaatg ccaatagacc aaggctttgc
      601 ctctttacag ccatcccttc atcatccttc aactaatcaa aatcaaacaa agctgacaca
      661 ttttgatcac tataatcagt atgaacaaca aaagatgcat ctgatggatc agccgaacag
      721 aatgatgagc aacacccctg ggaacggact cgcgtctccg cactcgcagt atcacacccc
      781 tcccgttcct caggtgcccc atggtggcag tggtggcggt cagatgggtg tctaccctgg
      841 catgcagaat gagaggcatg ggcaatcctt tgtggacagc agctccatgt ggggccccag
      901 ggctgttcag gtaccagacc agatacgagc cccctaccag cagcagcagc cacagccgca
      961 gccaccgcag ccggctccgt cggggccccc tgcacagggc caccctcagc acatgcagca
     1021 gatgggcagc tatatggcac gtggggattt ttccatgcag cagcatggtc agccacagca
     1081 gaggatgagc cagttttccc aaggccaaga gggcctcaat cagggaaatc cttttattgc
     1141 cacctcagga cctggccact tgtcccacgt gccccagcag agtcccagca tggcaccttc
     1201 cttgcgtcac tcggtgcagc agttccatca ccacccctct actgctctcc atggagaatc
     1261 cgttgcccac agtcccagat tctccccgaa tcctccccaa caaggggctg ttaggccgca
     1321 aacccttaac tttagttctc ggagccagac agtcccctct cctactataa acaactcagg
     1381 gcagtattct cgatatcctt acagtaacct aaatcaggga ttagttaaca atacagggat
     1441 gaatcaaaat ttaggcctta caaataatac tccaatgaat cagtccgtac caagataccc
     1501 caatgctgta ggattcccat caaacagtgg tcaaggacta atgcaccagc agcccatcca
     1561 ccccagtggc tcacttaacc aaatgaacac acaaactatg catccttcac agcctcaggg
     1621 aacttatgcc tctccacctc ccatgtcacc catgaaagca atgagtaatc cagcaggcac
     1681 tcctcctcca caagtcaggc cgggaagtgc tgggatacca atggaagttg gcagttatcc
     1741 aaatatgccc catcctcagc catctcacca gccccctggt gccatgggaa tcggacagag
     1801 gaatatgggc cccagaaaca tgcagcagtc tcgtccattt ataggcatgt cctcggcacc
     1861 aagggaattg actgggcaca tgaggccaaa tggttgtcct ggtgttggcc ttggagaccc
     1921 acaagcaatc caggaacgac tgatacctgg ccaacaacat cctggtcaac agccatcttt
     1981 tcagcagttg ccaacctgtc ctccactgca gcctcacccg ggcttgcacc accagtcttc
     2041 acctccacac cctcatcacc agccttgggc acagctccac ccatcacccc agaacacccc
     2101 gcagaaagtg cctgtgcatc agcattcccc gtcggagccc tttctagaga aaccagtgcc
     2161 ggatatgact caggttagtg gaccgaatgc tcagctagtg aagagtgatg attacctgcc
     2221 atcaatagaa cagcagccac aacaaaaaaa aaaaaaaaa
//