LOCUS BC053890 2259 bp mRNA linear HUM 30-JUN-2004 DEFINITION Homo sapiens chromodomain helicase DNA binding protein 7, mRNA (cDNA clone IMAGE:6148161), partial cds. ACCESSION BC053890 VERSION BC053890.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2259) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2259) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: l Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..2259 /db_xref="H-InvDB:HIT000259364" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6148161" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2259 /gene="CHD7" /gene_synonym="FLJ20357" /gene_synonym="FLJ20361" /gene_synonym="KIAA1416" /db_xref="GeneID:55636" CDS 476..>2259 /gene="CHD7" /gene_synonym="FLJ20357" /gene_synonym="FLJ20361" /gene_synonym="KIAA1416" /codon_start=1 /product="CHD7 protein" /protein_id="AAH53890.1" /db_xref="GeneID:55636" /translation="MSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASL QPSLHHPSTNQNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNTPGNGLASPHSQYHTP PVPQVPHGGSGGGQMGVYPGMQNERHGQSFVDSSSMWGPRAVQVPDQIRAPYQQQQPQ PQPPQPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQGN PFIATSGPGHLSHVPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSPNPPQQ GAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPM NQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSP MKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQ QSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQLPTC PPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQ VSGPNAQLVKSDDYLPSIEQQPQQKKKK" BASE COUNT 593 a 674 c 545 g 447 t ORIGIN 1 ggcggcggcg gcgcgggggt tgagtcgtgg tggtgcggac gcgctcgtgc tcgggaacta 61 tcggattaaa cttgaatcga gtgaaattac acaaaggagc gccgcggagg aggcggcccg 121 gggacccgga caccctgaaa ctcaccagag acccgttcgc ccccggccaa ctccgtgccc 181 gtggattcag ccccctggcc gcagctgccg agccaactcc ggagcccgct ctgcgttttg 241 ttttcccctc ggcactaggc agcggaggag cccgaccgac ccggacctat atccagactt 301 tgcctgacac tgcagggtcc aagagaatta aagaaatatg gaatgacatg aagaagatta 361 gttaaggatt ataggctttg agggcaaaca cctcagtgaa gtgaagcaca ggcaagctcc 421 tgagctgtgg tttggaggag ccgtgtgttg gaagaagatg gcagatccag gaatgatgag 481 tctttttggc gaggatggga atattttcag tgaaggtctt gaaggcctcg gagaatgtgg 541 ttacccggaa aatccagtaa atcctatggg tcagcaaatg ccaatagacc aaggctttgc 601 ctctttacag ccatcccttc atcatccttc aactaatcaa aatcaaacaa agctgacaca 661 ttttgatcac tataatcagt atgaacaaca aaagatgcat ctgatggatc agccgaacag 721 aatgatgagc aacacccctg ggaacggact cgcgtctccg cactcgcagt atcacacccc 781 tcccgttcct caggtgcccc atggtggcag tggtggcggt cagatgggtg tctaccctgg 841 catgcagaat gagaggcatg ggcaatcctt tgtggacagc agctccatgt ggggccccag 901 ggctgttcag gtaccagacc agatacgagc cccctaccag cagcagcagc cacagccgca 961 gccaccgcag ccggctccgt cggggccccc tgcacagggc caccctcagc acatgcagca 1021 gatgggcagc tatatggcac gtggggattt ttccatgcag cagcatggtc agccacagca 1081 gaggatgagc cagttttccc aaggccaaga gggcctcaat cagggaaatc cttttattgc 1141 cacctcagga cctggccact tgtcccacgt gccccagcag agtcccagca tggcaccttc 1201 cttgcgtcac tcggtgcagc agttccatca ccacccctct actgctctcc atggagaatc 1261 cgttgcccac agtcccagat tctccccgaa tcctccccaa caaggggctg ttaggccgca 1321 aacccttaac tttagttctc ggagccagac agtcccctct cctactataa acaactcagg 1381 gcagtattct cgatatcctt acagtaacct aaatcaggga ttagttaaca atacagggat 1441 gaatcaaaat ttaggcctta caaataatac tccaatgaat cagtccgtac caagataccc 1501 caatgctgta ggattcccat caaacagtgg tcaaggacta atgcaccagc agcccatcca 1561 ccccagtggc tcacttaacc aaatgaacac acaaactatg catccttcac agcctcaggg 1621 aacttatgcc tctccacctc ccatgtcacc catgaaagca atgagtaatc cagcaggcac 1681 tcctcctcca caagtcaggc cgggaagtgc tgggatacca atggaagttg gcagttatcc 1741 aaatatgccc catcctcagc catctcacca gccccctggt gccatgggaa tcggacagag 1801 gaatatgggc cccagaaaca tgcagcagtc tcgtccattt ataggcatgt cctcggcacc 1861 aagggaattg actgggcaca tgaggccaaa tggttgtcct ggtgttggcc ttggagaccc 1921 acaagcaatc caggaacgac tgatacctgg ccaacaacat cctggtcaac agccatcttt 1981 tcagcagttg ccaacctgtc ctccactgca gcctcacccg ggcttgcacc accagtcttc 2041 acctccacac cctcatcacc agccttgggc acagctccac ccatcacccc agaacacccc 2101 gcagaaagtg cctgtgcatc agcattcccc gtcggagccc tttctagaga aaccagtgcc 2161 ggatatgact caggttagtg gaccgaatgc tcagctagtg aagagtgatg attacctgcc 2221 atcaatagaa cagcagccac aacaaaaaaa aaaaaaaaa //