LOCUS BC053874 3958 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 117, mRNA (cDNA clone
MGC:61737 IMAGE:5531689), complete cds.
ACCESSION BC053874
VERSION BC053874.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: f Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27735132.
FEATURES Location/Qualifiers
source 1..3958
/db_xref="H-InvDB:HIT000054006"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61737 IMAGE:5531689"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3958
/gene="CCDC117"
/gene_synonym="dJ366L4.1"
/gene_synonym="FLJ33814"
/db_xref="GeneID:150275"
/db_xref="HGNC:HGNC:26599"
CDS 137..976
/gene="CCDC117"
/gene_synonym="dJ366L4.1"
/gene_synonym="FLJ33814"
/codon_start=1
/product="coiled-coil domain containing 117"
/protein_id="AAH53874.1"
/db_xref="GeneID:150275"
/db_xref="HGNC:HGNC:26599"
/translation="MAALGRPFSGLPLSGGSDFLQPPQPAFPGRAFPPGADGAELAPR
PGPRAVPSSPAGSAARGRVSVHCKKKHKREEEEDDDCPVRKKRITEAELCAGPNDWIL
CAHQDVEGHGVNPSVSGLSIPGILDVICEEMDQTTGEPQCEVARRKLQEIEDRIIDED
EEVEADRNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELL
SDKPKPSSNTKNYTGESQAKHVAAGTAFPQRTELFSEPRPTGMSLYNSLETATSTEEE
MEL"
BASE COUNT 1096 a 745 c 890 g 1227 t
ORIGIN
1 gttctagaag gcgtgacgtg gggtcgagag cgggatccga ggctggcggg ttttggcagt
61 agctgtggct gcggctgccg ggcctgggga cgcgggcggc cgaggccgcc gtcgcagcct
121 cctcgtctcg ccggctatgg ctgcgctcgg ccggcccttc agcggcctcc ctctgagcgg
181 cggctcggac ttcctgcagc cgccgcagcc ggccttcccc ggccgggcct tcccgccggg
241 ggctgacggc gccgagttgg ccccgcggcc gggacctcgc gcagtcccta gcagtcccgc
301 tgggagtgcg gcgcgcggac gtgtttctgt tcactgtaaa aagaaacaca agcgagagga
361 ggaggaggat gatgattgtc cagtaagaaa gaaaaggata actgaagcag agctctgtgc
421 tggtcctaat gactggattc tttgtgcaca tcaggatgta gaggggcatg gagtaaatcc
481 cagtgttagt ggcctttcca tacctgggat attagatgtt atttgtgaag aaatggatca
541 gacaactgga gaaccacagt gtgaagttgc ccgaaggaag cttcaggaga ttgaggacag
601 gataattgat gaagatgaag aagttgaagc tgacagaaat gttaaccatc tccccagtct
661 tgtcctttct gataccatga aaacaggttt gaagagggaa tttgatgaag tttttacaaa
721 gaaaatgatt gagtctatga gccgtccttc catggagctt gttctctgga aacccctccc
781 tgaactcctt tctgataagc caaagccatc ctctaatact aagaactata caggagagag
841 ccaagctaag catgtagctg ctggcactgc cttccctcag agaactgaac tgttttcgga
901 acctcggcca acagggatgt ctctttataa tagtttggag acagctacta gcacagaaga
961 agagatggaa ctctagaaac caatttctac actaaagttg tcaaatgtta gaagaatcct
1021 gtgttcagtt atgagactct ttgcatagta tagggacttg aaagttttat gagacgggtg
1081 taataatatc tccacctgtg atttgggggt gggactctta ttttgggtag ccatttattg
1141 acttcacctt tttgccaagg acgtttgtct caagggaaaa gcagttttct gtggggctta
1201 ttaaaggaat gttggtttac attgtcttca aagacaagta tagaagctgt atgtgtaagg
1261 gtgacttaaa tcatatgtca cattgtctaa actattcaga cacttggaga atattctcct
1321 tgaattaaaa aagatgatta agaaggatgc tcctacaact gtatcctgac agttaagtca
1381 cagcttaatg tgtagatatg agctgtttac agtggtgact atatataatt ggggagaaga
1441 agggaagaga gcagcagtag cttaagcctg ttgctaagaa atttaatttc ttagcaactt
1501 gtaatttagt tatcaattca atatagctct gttgattaaa tagccgatag tattgtggct
1561 ctcctctttg actatgaaaa tatagagaaa gttttttctt taaggctttt ttgccttgtg
1621 ccactgttgc tccttggttt cccttgcgta attgataagc ccagttattc agtaatgttt
1681 acaaattaat tgactttgat agttaaaaga ttatgaggta acccatctgc aatttgcctg
1741 tgggagaagc atcctttagt tcatcttaag gaagtgcttt atcagctaaa cccaacattg
1801 ataactttgg taattttttt aaaaagttat acttgtatta gcaagttttt tttttttccc
1861 ccaccgcaac ctccatctcc cgggttcaag caattctcct gcctcaccct cccaagtagc
1921 tgggattaca ggtgcccacc tccacgccca gctaattttt gtatttttaa tagagaccgg
1981 ttttgccatg ttggccaggc tggtctcgaa ctcctgacct caggtgatct gcccacccca
2041 gcctcccaaa atgctgggat tacaggcgtg agccacggca cgcagccagc aagttgtttt
2101 taaatgttaa tatagaaaac agtgaaggat tagctgaaaa tatatgagca ggtgacattg
2161 aggtttactg aaatagccaa tttgactggt gcttagacta ttgtgcagta aacctaaaag
2221 gtagtggaga attgcttcct gctagcagga agccttcatc ttcttgagta cccaaaccag
2281 gcttcaggtg tcctttgagg atagccaggt ttgaaatttt tagtttctca ggaagagctc
2341 ttctatgtgg caggggctga tagggcaaaa taaaatgaca atttctttat tgctacagag
2401 tatcctctat aagttattaa acgagtgtaa tggtataatg cccttccatc acacaacagg
2461 acaccacccc agttttgttt tctgggtttc ttcccccttt gtaggaatca gatacctttt
2521 gtagaaaaaa atggcttatg ccacgtaaag gtgaattttt agaaaccacc ttctaggcgt
2581 ttttggaacc cttactgaaa tccctcccct tgttacagat ggcgtagaag tcacaagtct
2641 gttaattgga ctgttgcttc tttgcctgtt cctgctttct ctttctgtct ggatagtcag
2701 gaaaagattt aatgtttaat atttaaacaa aatatttaat gtctatacag taaaattatt
2761 caaacttcaa accagtattg aaagcagttg gaaaccagct aatagtttct taatctcaga
2821 tttcgagatg aatgtaaact gtattctttt gaaatgtgca agtgtttgat tcatgccatt
2881 tgataaactt ctgccttgta gtcattgttt gatgggacca acttgtaaag tatgagcctt
2941 aaataaatct ccatgctgaa aaatgtgttc taatgcaaca caaaaacatg aagtgactgc
3001 ccagaggtag agttagtgtt taggtggaaa gggagatgac agctttccaa agaaggacct
3061 aaaacacacc aagattgtct tctacaggaa ttgctgggca ggtctccgac taaaggtctt
3121 atgatgaaaa ggaagaaaca agcccccaac acaaggctct gatactactg gtaaatgtag
3181 gagagaatta agaatctgtt aattaaaatc caaacagagc ttatttcagt agtcaagtta
3241 cctgacatga taattatttc tgcaggataa ttgatgtttt atgttctttt ttggacttta
3301 tcttcttgca aaaatttcta caaaaattgt tttcttcatc cttgtggtgc ttattcatct
3361 gagccgtctc cacagtccca atgcctctgc tttttgtttt acttttgtag cataaggttt
3421 ttgcttttgc tttgccttaa gagttcccta gggagttacc agggcttttc gttttgtgta
3481 gcttttgcag catggatcaa acattggctt actgtgctaa tgtgtgaaga gaaaaaattc
3541 tctaaagcag gtgagcttta atgaacaaat gtgtatttta tctgagtttg agtagggtgc
3601 gttgtggatt ttgttttttg ggtttttttt ttttttttgt aattatatga agaaagtcca
3661 gttctcataa atattgatca cttaaaaaac ttactctttc ttgaaaaggt acacatgtaa
3721 aatttaggaa aataactaaa gtaggggctg gaaccataag aagaatgttt atcagcacgt
3781 tcatttatta ttttggattt ggaacttggc tttgtttttc aatagtgaca agaatggttc
3841 agttctagga atgttctgga agatgctgtt aattttactt taaaatgaga atctggtgtt
3901 actgtatttt atcgttttca ataaaacttc ttaagtgttt tggaaaaaaa aaaaaaaa
//