LOCUS BC053867 2448 bp mRNA linear HUM 24-NOV-2004
DEFINITION Homo sapiens SET binding factor 2, mRNA (cDNA clone IMAGE:5198438),
partial cds.
ACCESSION BC053867
VERSION BC053867.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2448)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2448)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2448
/db_xref="H-InvDB:HIT000259356"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5198438"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2448
/gene="SBF2"
/gene_synonym="CMT4B2"
/gene_synonym="KIAA1766"
/gene_synonym="MTMR13"
/db_xref="GeneID:81846"
/db_xref="MIM:607697"
CDS <1..766
/gene="SBF2"
/gene_synonym="CMT4B2"
/gene_synonym="KIAA1766"
/gene_synonym="MTMR13"
/codon_start=2
/product="SBF2 protein"
/protein_id="AAH53867.1"
/db_xref="GeneID:81846"
/db_xref="MIM:607697"
/translation="WMMLTPKHFPSEDSDLAGEAGPRSQRRTVWPCYDDVSCTQPDAL
TSLFSEIEKLEHKLNQAPEKWQQLWERVTVDLKEEPRTDRSQRHLSRSPGIVSTNLPS
YQKRSLLHLPDSSMGEEQNSSISPSNGVERRAATLYSQYTSKNDENRSFEGTLYKRGA
LLKGWKPRWFVLDVTKHQLRYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDK
AFFDLKTSKRVYNFCAQDGQSAQQWMDKIQSCISDA"
BASE COUNT 783 a 522 c 485 g 658 t
ORIGIN
1 ctggatgatg ctaaccccca agcacttccc ctccgaagac tctgacctgg ctggagaagc
61 tgggccacgg agccagagga gaacagtgtg gccatgctat gatgatgtca gctgtactca
121 gcctgatgct ctcaccagcc ttttcagtga aattgaaaaa ttggagcaca aattgaacca
181 agcccctgag aagtggcagc agctgtggga aagggtaacc gtggacctta aagaagaacc
241 aagaacagat cgctcccaaa gacacctgtc gagatcccca ggaattgtgt ctaccaacct
301 accttcctat cagaagaggt ctctgctaca tctcccagac agcagcatgg gggaggaaca
361 gaattccagc atctccccat ccaatggagt ggagcgaaga gcagccacgc tctatagcca
421 gtatacatcc aagaatgatg aaaacaggtc ctttgaggga acactttata aaagaggggc
481 tttgctgaaa ggttggaagc cccgttggtt tgttttggat gtaacaaaac atcagctgcg
541 ctactatgac tcaggtgagg acacaagctg taaaggccac attgatctgg ctgaagtaga
601 aatggtcatc cctgctggcc ccagcatggg agccccaaag cacacaagtg acaaggcttt
661 ctttgatctc aagaccagca aacgtgtgta taacttctgc gcccaggatg gacagagtgc
721 ccagcaatgg atggacaaga tccagagttg tatctctgat gcctgatgcc catggtcaac
781 ccacgcagaa gaaacagaag aactcatgct gccagataga tagaaaaaga agcatggatc
841 cttgaggagc tgacaacaag ttatcccagg gcctgaggtt ctcctgccca gtcccctctt
901 gcaggggttg ctatatctac ttaacctgaa taggtgtttc acacaggtct ggtcaacagc
961 cccatgcact ccctgtatct tgcactaaat ttttctaaca gggtcttagt ggttaatgat
1021 cagaagatgt ctcctgagcc aactgtgaac ctcacccagg caaaatggct accacctact
1081 tgggtccttc ttcatgaaag ctatagatcc ttttttgttc tctgaggtca taatttcctc
1141 ggagacctgt ttaacaagca aaaatcaaaa ccctccaaga ttgtctcata ttctacctgg
1201 actaggtttc ctatgagaga catctacttg taatgcctga cctttgagat gctcagttct
1261 ctggtgctgc caaaagatgt ttccatggtc cgtgctctgc cagtggggtt cacaacaaga
1321 gacgtcattg ttcagtagca ggcaaagagg gagcacacag cattattctg atggaaaaag
1381 attatccagg gaatggtaca acaatgacca gcccaatgca ggaaaacact acttccaaaa
1441 cactgaattc tctagaccag aggtgctctg aggatccagg gccttgtgtt cttatgtatc
1501 ttctgcttcc tgacagcttc tttttcaaaa taacatgcaa aaaaagctga atgcactaac
1561 tcacaaaaca aacacttgca ctgaattccc aatgaagtga agatgttgga aagacagagg
1621 ccagctattt aggaccatac gcacctgtga caagggctgt gttgaccaca gtcacactgt
1681 ggcatgactg gatacccaaa ctacacttct acacatgaaa agtaagaact gtctttagat
1741 tttctttact ttgataactt gtgattgttt agcttaagac ccaagaaatg ctgtttgctc
1801 atggtaaaca gaaacagcat cttcgctaca accactgaca ccagctggcg tcataggtag
1861 ctagatcatt gcatttgttt tgaaatgtta atatgttaaa tactaaactg atatttcaaa
1921 aatgtgtata tatgatttct atatccttgt ttttcagata gcctgcttat aatttaatat
1981 aaattaactg atgcattcat aagatttcaa taatgaaatg gttccctttt aaaaaataaa
2041 aatactttgt agattaaaaa taaatcagaa tttcaaattt aaaattgtcc acacactagg
2101 aaatagaact gtgttaatat ataagaaatt tggggataat taagaatgaa ggacttttct
2161 atcatttcca ttttataaat tgccacctgt gaaaatggtt tttgcacatt atttgtattt
2221 ttctttgtat atgaaataat tttttgtact ttgtaaaata tggagcccat tgtaccttca
2281 actatttgag actatacaca gtgcttcttt tgtaactgga ttactttaac tttcgtgaag
2341 gcattacatt gcctcacatt cactaaccac cttgaattaa atttatttct taaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//