LOCUS BC053857 1329 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens DPH5 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:61450 IMAGE:5503038), complete cds.
ACCESSION BC053857
VERSION BC053857.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706271.
FEATURES Location/Qualifiers
source 1..1329
/db_xref="H-InvDB:HIT000053995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61450 IMAGE:5503038"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1329
/gene="DPH5"
/gene_synonym="AD-018"
/gene_synonym="CGI-30"
/gene_synonym="HSPC143"
/gene_synonym="MGC61450"
/gene_synonym="NPD015"
/db_xref="GeneID:51611"
/db_xref="HGNC:HGNC:24270"
CDS 114..971
/gene="DPH5"
/gene_synonym="AD-018"
/gene_synonym="CGI-30"
/gene_synonym="HSPC143"
/gene_synonym="MGC61450"
/gene_synonym="NPD015"
/codon_start=1
/product="DPH5 homolog (S. cerevisiae)"
/protein_id="AAH53857.1"
/db_xref="GeneID:51611"
/db_xref="HGNC:HGNC:24270"
/translation="MLYLIGLGLGDAKDITVKGLEVVRRCSRVYLEAYTSVLTVGKEA
LEEFYGRKLVVADREEVEQEADNILKDADISDVAFLVVGDPFGATTHSDLVLRATKLG
IPYRVIHNASIMNAVGCCGLQLYKFGETVSIVFWTDTWRPESFFDKVKKNRQNGMHTL
CLLDIKVKEQSLENLIKGRKIYEPPRYMSVNQAAQQLLEIVQNQRIRGEEPAVTEETL
CVGLARVGADDQKIAAGTLRQMCTVDLGEPLHSLIITGGSIHPMEMEMLSLFSIPENS
SESQSINGL"
BASE COUNT 387 a 254 c 316 g 372 t
ORIGIN
1 cggagccggc gcttttgcag ttgcttctgc ggaaaggtgg tagttaagaa tttgtaaagg
61 ccagagaact acctacgatt ctctcagcgg tctctcttct cctcaagttt gaaatgcttt
121 atctcatcgg gttgggcctg ggagatgcca aggacatcac agtcaagggc ctggaagttg
181 ttagacgctg cagtcgagtg tatctggaag cctacacctc agtcctaact gtagggaagg
241 aagccttgga agagttttat ggaagaaaat tggttgttgc tgatagagaa gaagtggaac
301 aagaagcaga taatatttta aaggatgctg atatcagtga tgttgcattc cttgtggttg
361 gtgatccatt tggggccaca acacacagtg atcttgttct aagagcaaca aagctgggaa
421 ttccttatag agttattcac aatgcctcca taatgaatgc tgtaggctgc tgtggtttac
481 agttatataa gtttggagag acagtttcta ttgttttttg gacagacact tggagaccag
541 aaagcttctt tgacaaagtg aagaagaaca gacaaaatgg catgcacaca ttatgtttac
601 tagacatcaa agtaaaggag cagtctttgg aaaatctaat caagggaagg aagatctatg
661 aacctccacg gtatatgagt gtaaaccaag cagcccagca gcttctggag attgttcaaa
721 atcaaagaat acgaggagaa gaaccagcag ttaccgagga gacactttgt gttggcttag
781 ccagggttgg agccgacgac cagaaaattg cagcaggcac tttaaggcaa atgtgcactg
841 tggacttggg agaaccattg cattccttga tcatcacagg aggcagcata catccaatgg
901 agatggagat gctaagtctg ttttccatac cagaaaatag ctcagaatct caaagcatca
961 atggactttg aacatagata tttaccattg tctgatgtaa atttcagcca tatatggatt
1021 gatatggttt ggatgtatcc ccacccaagt ctcatcttga attttaatcc tcataattcc
1081 caggtgttgt ggtaggtaat tgaatcatgg gggcagtttc cctcatgcta ttctcatgat
1141 agtgagcttt catgagatct gatggtttta taagtgcctg gcatttcccc tactggctct
1201 cattctcact cttgccgccc tgtgaagagg tgccttccac cgtgattgtt aagtttcctg
1261 aggccttccc agccatgtgg aactgtgagt cgaaaattaa acctctttta taattaaaaa
1321 aaaaaaaaa
//