LOCUS BC053845 2794 bp mRNA linear HUM 08-OCT-2003 DEFINITION Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone MGC:61630 IMAGE:5493685), complete cds. ACCESSION BC053845 VERSION BC053845.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2794) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2794) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: e Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2794 /db_xref="H-InvDB:HIT000053987" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61630 IMAGE:5493685" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2794 /gene="HKR1" /db_xref="GeneID:284459" /db_xref="MIM:165250" CDS 290..2086 /gene="HKR1" /codon_start=1 /product="HKR1 protein" /protein_id="AAH53845.1" /db_xref="GeneID:284459" /db_xref="MIM:165250" /translation="MLETYNHLVSLEIPSSKPKLIAQLERGEAPWREERKCPLDLCPE SKPEIQLSPSCPLIFSSQQALSQHVWLSHLSQLFSSLWAGNPLHLGKHYPEDQKQQQD PFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPEEQQPAQSKEDNTVVDIGSSP ERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYTEWG DSFGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDCGRG FTWKSNLFTHQRTHSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGRGFR QHSHLVRHKRTHSGEKPYICRECEQGFSQKSHLIRHLRTHTGEKPYVCTECGRHFSWK SNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEKPFVCTECGRGFTRKST LSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGRRFRQKPNLF RHKRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIRHQR THSGEKPYICRKCGRGFSRKSNLIRHQRTHSG" misc_feature 290..382 /gene="HKR1" /note="KRAB; Region: krueppel associated box" /db_xref="CDD:smart00349" misc_feature 1253..2083 /gene="HKR1" /note="COG5048; Region: COG5048, FOG: Zn-finger [General function prediction only]" /db_xref="CDD:COG5048" BASE COUNT 789 a 650 c 719 g 636 t ORIGIN 1 aactgacgtg ctgagcagct aattcagtgc ctgaggttac actagttgtg gacagagatg 61 ggttccaaat ccagatagta tgggttgaat ccacgctctt catcaccacc cactttccct 121 ccttaggcct gagcaggcac atggcagcat ttggtagagg aaggagtgag ccctgctgta 181 ggaactatat atattggcgt tcgtggcatt cagggatgtg gctgtgtact tcacccagga 241 ggagtggagg ttgttgagcc ctgctcagag gaccctgcac agggaggtga tgctggagac 301 ttataaccat ctggtctcac tggaaattcc atcttctaaa ccaaaactca ttgctcagct 361 ggagcgaggg gaagcgccct ggagagagga gagaaaatgt ccactggacc tctgtccaga 421 atcgaagcca gaaattcaac ttagtccctc ctgccctctg attttctcca gtcagcaagc 481 tctcagccaa catgtgtggc tgagtcatct ctctcagctg ttttcaagtt tatgggcagg 541 aaatcctctc cacctgggaa aacactatcc agaagatcag aaacaacagc aggatccatt 601 ctgctttagt ggcaaagcag aatggattca agagggagaa gactccagac tcctgtttgg 661 gagagtaagc aaaaatggca cttcaaaggc actttccagc ccacctgaag aacaacagcc 721 agcacagtcc aaggaagaca acacagtggt ggatataggg tccagccctg aacggagggc 781 agatctagag gaaacagaca aagtattgca tggtttagaa gtctcaggat ttggagaaat 841 caaatatgaa gagtttgggc caggctttat caaggagtca aacctcctta gcctccagaa 901 gacacaaact ggggagacac cttacatgta cactgagtgg ggagacagct ttggcagtat 961 gtcagtcctc atcaaaaacc caaggacaca ctctggggga aagccttatg tgtgcaggga 1021 atgtgggcga ggctttacgt ggaagtcaaa cctgatcaca catcagagga cacactcagg 1081 ggagaaacct tatgtgtgca aggattgtgg acgaggcttt acttggaagt cgaacctctt 1141 tacacatcag cggacacact cagggctcaa gccttatgtg tgcaaggaat gtgggcagag 1201 ctttagcctg aagtcaaacc tcattaccca ccagagggcg cacactgggg agaagcctta 1261 tgtttgcagg gaatgtgggc gtggctttcg ccagcattca cacctggtca gacacaagag 1321 gacacattca ggagagaagc cttacatttg cagggagtgt gagcaaggct ttagccagaa 1381 gtcacacctc atcagacact taaggacaca cacaggagag aagccttatg tatgcacaga 1441 atgtgggcgt cactttagct ggaaatcaaa cctcaaaaca caccagagga cacactcagg 1501 ggttaaacct tatgtctgcc tggagtgcgg gcagtgcttt agcctgaagt caaaccttaa 1561 caaacaccag aggtcacaca cgggggagaa gccatttgta tgtacggagt gtgggcgagg 1621 ctttacccgg aaatcaaccc tgagcacgca ccagaggaca cactcagggg agaagccatt 1681 tgtatgtgct gagtgtggac gaggctttaa tgataagtcc accctcattt cacaccagag 1741 gacacattca ggggaaaagc cttttatgtg cagggagtgt ggcagaaggt ttcggcagaa 1801 gcctaacctg tttaggcaca agagggcaca ctcaggtgcc tttgtgtgca gggagtgtgg 1861 gcaaggcttt tgtgctaagt taactctcat taaacaccag agagcacacg caggggggaa 1921 gcctcatgtg tgcagggagt gtgggcaagg ctttagccgg cagtcacacc tcattagaca 1981 ccagaggaca cattcaggag agaagcctta tatttgcaga aagtgtggac ggggctttag 2041 tcggaagtcc aaccttatca gacatcagag gacacactca ggatagaaac tttatgtgta 2101 tagggaatgt ggtacagcct ttagccagga gtcatacttc atcagacacc agaggacaca 2161 cacagtgctg tggctttttc agccattgct agataccaaa gtggagacat tctgtgtgtg 2221 attatgcatg agactgtact ggtaagactt gtatctccat ccacctgaag gagaattgct 2281 ggctcatttt caggagccct gcccttcctc actgtggatg gtgggttgtg gaaacccggt 2341 caggtaatga tagtggcagg aggcagtcaa atgcccaggc agataggggt gggtacctgg 2401 tgaaacccaa ccttaaagct gaagacagtc ccggctaaat cctcatactg aattgagaac 2461 ctgtcttccc atttggtgtg ctttcctccg attgatccca acccttcacc tattttacgt 2521 atacctgccc tttcctaatt ggtttttaca ctgctgtgcc caccttttga gtggtgcctt 2581 tgcatactta caaatcagtc aacgtgtatt cccctattct gagcccataa aagacccaga 2641 ctcagctgca gtgaggagag aaatcaccct gctgtggggg ttggggacca ctccctgcat 2701 cccctctcca ctgagagctg ttcttttgct caataaaatt cttttctacc catcctcaaa 2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //