LOCUS BC053663 1426 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens YdjC homolog (bacterial), mRNA (cDNA clone
IMAGE:6024618), with apparent retained intron.
ACCESSION BC053663
VERSION BC053663.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: j Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63054869
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1426
/db_xref="H-InvDB:HIT000259333"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6024618"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 265 a 468 c 458 g 235 t
ORIGIN
1 cccaggcggc catgtcccgc cctcgcatgc gcctggtggt caccgcggac gactttggtt
61 actgcccgcg acgcgatgag ggtatcgtgg aggcctttct ggccggggcc gtgaccagcg
121 tgtccctgct ggtcaacggt gcggccacgg agagcgcggc ggagctggcc cgcaggcaca
181 gcatccccac gggcctccac gccaacctgt ccgagggccg ccccgtgggt ccggcccgcc
241 gtggcgcctc atcgctgctc ggcccggaag gcttcttcct tggcaagatg ggattccggg
301 aggcggtggc ggccggagac gtggatttgc ctcaggtgcg gagccgcagc tacaggagga
361 tgctcgcgag gacccccaga gctccgcccg gagggtgcgg gaggagctcg aggcccaact
421 aagctgcttc cgggagctgc tgggcagggc ccccacgcac gcggacgggc accagcacgt
481 gcacgtgctc ccaggcgtgt gccaggtgtt cgccgaggcg ctgcaggcct atggggtgcg
541 ctttacgcga ctgccgctgg agcgcggtgt gggtggctgc acttggctgg aggcccccgc
601 gcgtgccttc gcctgcgccg tggagcgcga cgcccgggcc gccgtgggcc ccttctcccg
661 ccacggcctg cggtggacag acgccttcgt gggcctgagc acttgcggcc ggcacatgtc
721 cgctcaccgc gtgtccgggg ccctggcgcg ggtcctggaa ggtaccctag cgggccacac
781 cctgacagcc gagctgatgg cgcaccccgg ctaccccagt gtgcctccca ccggcggctg
841 cggtgaaggc cccgacactt tctcttgctc ttgggagcgg ctgcatgagc tgcgcgtcct
901 caccgcgccc acgctgcggg cccagcttgc ccaggatggc gtgcagcttt gcgccctcga
961 cgacctggac tccaagaggc caggggagga ggtcccctgt gagcccactc tggaaccctt
1021 cctggaaccc tccctactct gaccccctac agacaaccaa gcactaatcc ccttagtacc
1081 aagaaagggg agccaggatt tagtcctggc ccagcccaga gctgggacct ggagcacgat
1141 ctgttgactt ccctgggtag gacactgcca cctctgggct caggtcctca tgcctccaaa
1201 tggcatctag agtttgagca gccttcttgg ctgcaggcag gcctagcctg tggcagcggg
1261 ctagggcccg cagagcattt ggtgcccctc catgttgcaa tgcaaacacc ttcaccactg
1321 gggcagtggg gagagatggc tatattaata aaataacgtg tgtctttcaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//