LOCUS BC053655 2540 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens FYVE, RhoGEF and PH domain containing 2, mRNA (cDNA clone MGC:61693 IMAGE:5755893), complete cds. ACCESSION BC053655 VERSION BC053655.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2540) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2540) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: h Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222232. FEATURES Location/Qualifiers source 1..2540 /db_xref="H-InvDB:HIT000053959" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61693 IMAGE:5755893" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2540 /gene="FGD2" /gene_synonym="ZFYVE4" /db_xref="GeneID:221472" /db_xref="HGNC:HGNC:3664" /db_xref="MIM:605091" CDS 117..2084 /gene="FGD2" /gene_synonym="ZFYVE4" /codon_start=1 /product="FYVE, RhoGEF and PH domain containing 2" /protein_id="AAH53655.1" /db_xref="GeneID:221472" /db_xref="HGNC:HGNC:3664" /db_xref="MIM:605091" /translation="MKGASEEKLASVSNLVTVFENSRTPEAAPRGQRLEDVHHRPECR PPESPGPREKTNVGEAVGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQEP EKKIVQELLETEQAYVARLHLLDQVFFQELLKTARSSKAFPEDVVRVIFSNISSIYQF HSQFFLPELQRRLDDWTANPRIGDVIQKLAPFLKMYSEYVKNFERAAELLATWTDKSP LFQEVLTRIQSSEASGSLTLQHHMLEPVQRIPRYELLLKEYIQKLPAQAPDQADAQKA LDMIFSAAQHSNAAITEMERLQDLWEVYQRLGLEDDIVDPSNTLLREGPVLKISFRRN DPMERYLFLFNNMLLYCVPRVIQVGAQFQVRTRIDVAGMKVRELMDAEFPHSFLVSGK QRTLELQARSQEEMISWMQAFQAAIDQIEKRNETFKAAAQGPEGDIQEQELQSEELGL RAPQWVRDKMVTMCMRCQEPFNALTRRRHHCRACGYVVCARCSDYRAELKYDDNRPNR VCLHCYAFLTGNVLPEAKEDKRRGILEKGSSATPDQSLMCSFLQLIGDKWGKSGPRGW CVIPRDDPLVLYVYAAPQDMRAHTSIPLLGYQVTVGPQGDPRVFQLQQSGQLYTFKAE TEELKGRWVKAMERAASGWSPSWPNDGDLSD" BASE COUNT 601 a 744 c 735 g 460 t ORIGIN 1 acagattcat gggtgattta gcctatctgt cccaggccag cgtggctgag tgtgctggct 61 ggaggcctct ctctctgctt cgagggtagc tgagatccac cccggaaacc ggcaggatga 121 agggggcaag tgaggagaag ctggcatctg tgtccaacct ggtcactgtg tttgagaata 181 gcaggacccc agaagcagca cccagaggcc agaggctaga ggacgtgcat caccgccctg 241 agtgcaggcc tcccgagtcc ccaggaccac gggagaagac gaatgtcggg gaggccgtgg 301 ggtctgagcc caggacagtc agcaggaggt acctgaactc cctgaagaac aagctgtcca 361 gcgaagcctg gaggaaatct tgccagcctg tgaccctctc aggatcgggg acacaggagc 421 cagagaagaa gatcgtccag gagctgctgg agacagagca ggcctatgtg gcgcgcctcc 481 acctgctaga ccaggtgttt ttccaggagc tgctgaagac agcccgcagc agcaaggcct 541 tcccagagga tgtggtcagg gtcatcttct ccaacatctc ctccatctat cagttccatt 601 ctcagttctt cctcccagag ctgcagcggc gcctggacga ctggacagct aacccccgca 661 tcggtgacgt gatccagaag ctggccccct tcctgaagat gtacagtgag tatgtcaaga 721 actttgagcg agcggctgag ctgctggcca cctggaccga caagtctcca ctcttccagg 781 aggttctcac tcgcatccag agcagcgagg cttcgggcag cctgaccctg cagcaccaca 841 tgctggaacc agtgcagaga attccacgtt acgagctgct gctcaaggag tacatccaga 901 agctgccagc ccaggcccca gaccaggccg atgcccagaa agccctggac atgatcttct 961 cagctgccca gcactccaat gcagccatca ctgagatgga gcggctgcag gacctgtggg 1021 aggtgtacca gcgcctgggc ctcgaggacg acatagtaga cccctctaac accctgctcc 1081 gtgagggccc ggtcctcaag atctccttcc gccgcaacga ccccatggag cgctaccttt 1141 tcttgttcaa caacatgctg ctctactgtg tgcccagggt gatccaggtg ggcgcccagt 1201 tccaggtgag gacccgcatc gatgtggccg ggatgaaggt gcgggagctg atggatgctg 1261 agtttcccca ctccttcctg gtgtccggga agcagcgcac cctggagctg caagcccggt 1321 cccaggagga aatgatttcc tggatgcagg ccttccaagc agccattgac caaatcgaga 1381 agcggaatga aaccttcaag gctgcggccc aggggcctga gggagacatc caggagcagg 1441 agctgcagtc tgaggagctg ggcctccggg caccgcagtg ggtccgggac aagatggtga 1501 ccatgtgcat gcgctgccag gagcccttca acgctctgac gcgccgtcgc caccactgcc 1561 gggcctgcgg ctatgtggtg tgtgccaggt gctccgacta ccgggccgaa ctgaaatacg 1621 acgacaacag gcccaaccga gtctgcctcc actgctacgc attcctcact ggaaatgtgc 1681 tgcctgaggc caaggaggac aagaggcggg gcatcctgga gaaagggtcc tcagccacac 1741 ctgaccagag cctgatgtgc agcttcctgc agctcatcgg ggacaagtgg ggcaagagcg 1801 gcccccgggg ctggtgtgtg atccctcggg atgaccccct cgtgctctat gtctatgctg 1861 cccctcagga catgagggct cacacctcca tccccctgct gggctaccag gtgactgttg 1921 ggccccaggg ggaccctcgg gtcttccagc tacagcagtc aggccagctc tacaccttca 1981 aggccgagac ggaggagctg aagggccgct gggtgaaggc catggagcgg gcggccagtg 2041 gctggagccc cagctggccc aacgatgggg acctgtccga ctgagccact gccagccgct 2101 ctcctgccca cctctcccca ccctgaaccc agctcctgcc acagactgac cctgtggcct 2161 cagtgaccca ctgccccaag tggtgctttc agagaattga ttcagccatc tgcgcccagg 2221 ccacgtgtcc cgatctggga ttagaaaata tgggtccatt cctttctaga aaggggacaa 2281 ccaagtgtct cagtttgcct tgcggggagg gggctcctgg gccatgggac ttccagtgct 2341 aaaactggga aagccccagg taaccccgga ctggtggtca ccatagtatg gtttttcatt 2401 tgtatctcct ggggagcttt taaagagtac tggtgaaaaa cacatagtaa attaatttta 2461 aaaatgtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2521 aaaaaaaaaa aaaaaaaaaa //