LOCUS BC053623 3092 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57, mRNA
(cDNA clone IMAGE:6162121), partial cds.
ACCESSION BC053623
VERSION BC053623.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3092)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3092)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: m Column: 12.
FEATURES Location/Qualifiers
source 1..3092
/db_xref="H-InvDB:HIT000259318"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6162121"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3092
/gene="DHX57"
/db_xref="GeneID:90957"
CDS <1..2561
/gene="DHX57"
/codon_start=3
/product="DHX57 protein"
/protein_id="AAH53623.1"
/db_xref="GeneID:90957"
/translation="QSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIP
QFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS
SATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGL
QVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRS
MKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGV
SKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQ
SNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVV
YVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNH
QLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRD
LGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSP
WDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQE
MASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAM
LCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVR
HFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIR
FVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIVKLVTTQ"
misc_feature 3..605
/gene="DHX57"
/note="HrpA; Region: HrpA-like helicases [DNA replication,
recombination, and repair]"
/db_xref="CDD:COG1643"
misc_feature 885..2288
/gene="DHX57"
/note="HrpA; Region: HrpA-like helicases [DNA replication,
recombination, and repair]"
/db_xref="CDD:COG1643"
BASE COUNT 917 a 640 c 711 g 824 t
ORIGIN
1 tccagtccat tctgcaagag aggcaatcac tccctgcttg ggaagaaaga gaaaccattc
61 ttaacttatt gcgtaagcac caggtggttg tcataagtgg tatgactgga tgtgggaaaa
121 ccacacaaat tccgcagttt attctggatg attctctgaa tggaccacct gagaaggtag
181 ccaacatcat ctgtacccaa ccccgacgaa tctctgcaat ctctgttgct gaacgcgttg
241 ctaaagaaag agcagagagg gtgggtctga ccgtgggata ccagattcgg ttagaaagtg
301 tcaagtcctc agccaccaga ctgttatact gcaccacggg agtgctgctg agaaggctag
361 aaggagatac agctctacaa ggagtttccc atatcattgt tgatgaagtt catgagagga
421 cagaagaaag tgacttcttg ctgctagttt tgaaggacat tgtatcgcag aggccaggtc
481 ttcaagttat tttaatgagt gcaactctaa acgctgagct tttttcagac tattttaatt
541 cctgccccgt tattactata ccaggtcgta catttcctgt tgatcaattt tttttggaag
601 atgcaattgc tgtgacaagg tatgtattac aggatgggag cccatatatg cggtccatga
661 aacagatttc aaaggaaaag cttaaagcaa ggcggaacag aactgcattt gaagaagtgg
721 aagaagacct aaggctctcc cttcacctcc aggatcagga ttctgtcaaa gatgcagtgc
781 cagatcaaca gttagatttt aagcagctcc tggcccgcta taaaggggtt agcaagtcag
841 tcatcaaaac aatgtccatc atggattttg aaaaggtgaa tcttgaatta atagaggcct
901 tattagagtg gattgtggat ggaaagcact cctaccctcc aggtgctata cttgtatttt
961 taccaggact agcagaaatc aaaatgcttt atgaacagct acagtctaat tctcttttca
1021 acaacagacg tagtaatcga tgtgttattc acccacttca ttcatcttta tccagtgaag
1081 agcagcaggc tgtgtttgta aaacctcctg caggagtaac taagattata atttccacca
1141 acattgctga gacatccata accatcgatg atgttgtcta tgttatcgat tctgggaaaa
1201 tgaaagaaaa gagatatgat gccagcaaag ggatggaaag tctagaggac acctttgtat
1261 ctcaagctaa tgctctacaa aggaaaggcc gagcaggccg tgttgcatct ggggtctgct
1321 tccatttatt cactagccat cactacaatc accagctttt aaaacaacag ctaccagaaa
1381 tacaaagagt gccattggaa cagctgtgtc taagaattaa aattttagag atgtttagtg
1441 ctcataatct ccagtctgtg ttctctcggc tcattgaacc tccacacacc gattctcttc
1501 gtgcctcaaa aatacgatta cgagacttag gagcattaac tccagatgaa agattgaccc
1561 ctcttgggta tcatttggcc tctctgcccg tggatgtgag aattggcaaa ctaatgttgt
1621 ttgggtctat cttccgctgt ttggatcctg ctctcaccat tgctgccagt ttggctttta
1681 agtcgccgtt tgtatctccc tgggataaaa aagaagaagc taaccagaaa aagctggaat
1741 ttgcattcgc aaacagtgat tatctggccc ttctacaagc gtataaggga tggcagctaa
1801 gtacaaaaga aggcgtgcgt gcaagttata attactgcag acaaaacttc ttgtctggaa
1861 gagttctgca ggaaatggcc agcctcaaac gacaattcac ggaactgtta tcggatatag
1921 ggtttgcaag ggaagggctc agagcaaggg aaattgagaa aagggcccaa ggaggagatg
1981 gtgtcttaga tgccacagga gaagaggcaa actcaaatgc tgagaacccc aagctgatat
2041 cagcaatgct gtgtgctgct ttgtatccaa atgtagtgca ggtgaaaagc ccagaaggaa
2101 aatttcagaa gaccagtact ggagctgtca gaatgcaacc aaaatcagct gagttgaagt
2161 ttgtcaccaa gaacgatgga tatgtacaca ttcacccttc atcagtgaac tatcaggtga
2221 gacactttga cagcccctac ctgttgtacc acgagaagat aaaaactagt cgagtattca
2281 tccgagactg cagcatggtg tctgtgtacc cgctggtctt gtttggagga ggccaagtga
2341 atgtgcagct tcaaagagga gagttcgttg tctccctgga tgatggttgg atccgttttg
2401 tagctgcttc ccatcaggtg gctgaactgg taaaggagct tcgttgtgaa cttgatcagc
2461 ttctccagga taaaattaaa aacccaagca ttgatctgtg tacgtgtcct cgaggatccc
2521 ggatcatcag cacaattgtg aaacttgtca ccacacaata aaaagcagtc ttagagagtg
2581 cttgctactc acctgcttct agctcacctg ggaaataaca gcagaacctc tacctcgaac
2641 taaagaccta ttggggctgg ccctggtgga ggagcccagg gcatgaagcc caaggcagct
2701 gaggcagtgt atataccctt agggccattt ctaacaaagc cttggccact cccagcacaa
2761 tttggagtgt caagggtgag agcctaaaac ccagcttgcc tgtctttgtc tctgtgattg
2821 ttctggagtg aattaagttc acctgataac tcaaaagtga atgtataata caattctgtt
2881 ttaatctgtg tattcttttt ctcctacttt ttactggggt gagaggggca tgaagagaaa
2941 tacgcctttt tttttttttt cttttcctgt cgccaaggct cgactgagag aagtcagaac
3001 agagaagggg aaaaaaaacc caaaattatg tgaacaagca aaattaaaat ttcattttag
3061 gctattggct actgagtaaa aaaaaaaaaa aa
//