LOCUS BC053615 2956 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens SCL/TAL1 interrupting locus, mRNA (cDNA clone
IMAGE:6142089), partial cds.
ACCESSION BC053615
VERSION BC053615.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506958.
FEATURES Location/Qualifiers
source 1..2956
/db_xref="H-InvDB:HIT000259314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6142089"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2956
/gene="STIL"
/db_xref="GeneID:6491"
/db_xref="HGNC:HGNC:10879"
/db_xref="IMGT/GENE-DB:10879"
/db_xref="MIM:181590"
CDS 198..>2956
/gene="STIL"
/codon_start=1
/product="STIL protein"
/protein_id="AAH53615.1"
/db_xref="GeneID:6491"
/db_xref="HGNC:HGNC:10879"
/db_xref="IMGT/GENE-DB:10879"
/db_xref="MIM:181590"
/translation="MEPIYPFARPQMNTRFPSSRMVPFHFPPSKCALWNPTPTGDFIY
LHLSYYRNPKLVVTEKTIRLAYRHAKQNKKNSSCFLLGSLTVDEDEEGVTLTVDRFDP
GREVPECLEITPTASLPGDFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCHICSK
DSLDCALARNLSSNLNISQVQGTYKYGYLTMDETRKLLLLLESDPKVYSLPLVGIWLS
GITHIYSPQVWACCLRYIFNSSVQERVFSESGNFIIVLYSMTHKEPEFYECFPCDGKI
PDFRFQLLTSKETLHLFKNVEPPDKNPIRCELSAESQNAETEFFSKASKNFSIKRSSQ
KLSSGKMPIHDHDSGVEDEDFSPRPIPSPHPVSQKISKIQPSVPELSLVLDGNFIESN
PLPTPLEMVNNENPPLINHLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKP
ALLRHCKVRQPPAYKKGNPHTRNSIKPSSHNGPSHDIFEKLQTVSAGNVQNEEYPIRP
STLNSRQSSLAPQSQPHDFVFSPHNSGRPMELQIPTPPLPSYCSTNVCRCCQHHSHIQ
YSPLNSWQGANTVGSIQDVQSEALQKHSLFHPSGCPALYCNAFCSSSSPIALRPQGDM
GSCSPHSNIEPSPVARPPSHMDLCNPQPCTVCMHTPKTESDNGMMGLSPDAYRFLTEQ
DRQLRLLQAQIQRLLEAQSLMPCSPKTTAVEDTVQAGRQMELVSVEAQSSPGLHMRKG
VSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFSVDINNEVTSLPGSASSL
KAVDIPSFEESNIAVEEEFNQPLSVSNGQLAESVSMCLQTGPTGGASNNSETSEEPKI
EHVMQPLLHQPSDNQKIYQDLLGQVNHLLNSSSKETEQPSTKAVIISHECTRTQNVYH
TKKKK"
BASE COUNT 900 a 664 c 585 g 807 t
ORIGIN
1 gccggagtcg gcggtggcgc tccttggagc cggctcccgc tcctaccctg caaacagacc
61 tcagctccgc ggaagttgcg caggagaata atttgatcag atttatatgg aaacactctt
121 ctagcagcat tatggggact tttccataag tctggatact gaggatttgg aattaaagaa
181 atcattcacc agacatcatg gagcctatat atccttttgc acggccccag atgaatacca
241 ggtttccttc aagcaggatg gtacctttcc actttcctcc atcaaaatgt gcactttgga
301 acccaacgcc aactggagat ttcatctact tacatctcag ttactacaga aatccaaagc
361 ttgtggtgac tgagaagacc atccgacttg cttatcgtca tgctaagcag aataaaaaaa
421 attcgtcatg ctttttactt ggttctctga cagtagacga agatgaagaa ggtgtaacat
481 tgacagtaga tcgctttgat cctggtcgag aagtacctga atgcctagaa ataaccccta
541 ctgcttctct tcctggggac tttttgattc catgcaaagt tcatactcaa gaactttgtt
601 caagagaaat gatagttcac agtgtagatg acttcagttc agctttaaag gctctacagt
661 gccatatatg tagcaaagat tccttggact gtgctctggc aagaaacttg agcagtaatc
721 tgaatatttc tcaagttcaa gggacttata aatatggata tcttaccatg gatgaaacac
781 gcaaattgtt acttttgttg gaatctgatc ccaaggttta ttctctacca ttggtgggaa
841 tttggctgtc tggaattaca catatctata gtcctcaggt atgggcttgc tgtttgcgat
901 acatattcaa ttcttctgtt caagaaaggg ttttttcaga atctggaaat ttcatcatag
961 ttctctattc tatgacacat aaggaacctg agttttatga atgcttccct tgtgatggca
1021 agatacctga ctttcggttt cagttgctaa ccagtaagga aacattacat cttttcaaaa
1081 atgttgaacc tcctgacaaa aatccaatcc gttgtgaact gagcgctgaa agccaaaatg
1141 cagaaacaga gtttttcagt aaggcttcca agaatttttc aattaagagg tcttcccaaa
1201 agttatcttc tgggaagatg ccaatacatg atcacgactc tggtgttgaa gatgaagatt
1261 tttctccaag accaattcct agtcctcatc cagtgagtca gaagatttct aagatccaac
1321 catcagttcc tgaactttca cttgtgttgg atggcaattt catagaatca aaccctctgc
1381 ctactccatt ggaaatggtg aataatgaaa atcctccttt gattaaccac ttggaacact
1441 tgaagccatt gcaaccccag ctttatgatg agaaacacag tccagaagtt gaagctggag
1501 agccttcctt gagaggaata ccaaatcagt taaaccagga taaaccagct cttttgagac
1561 actgcaaagt aagacagcca cctgcctata agaaagggaa cccccatacc aggaacagta
1621 ttaaaccatc ttctcataat gggccatctc atgatatatt tgaaaagctc caaacagttt
1681 ctgctggaaa tgtacaaaac gaagagtatc ctataagacc ctccacactt aattctaggc
1741 agtcttctct tgccccgcag tcccaaccac acgattttgt tttttcaccc cataattcag
1801 gaagaccaat ggaacttcag atacctactc ccccactgcc atcttactgt tccacaaacg
1861 tttgcaggtg ttgtcagcat catagtcata ttcaatatag tccgctaaat tcttggcaag
1921 gagcaaacac agttggatcc attcaagatg tccagtctga agcccttcaa aagcattcat
1981 tatttcaccc aagtggatgt ccagccctgt actgtaatgc attctgttct tcaagtagtc
2041 ctatagcctt gagacctcag ggagatatgg gcagttgttc tccccacagc aatattgaac
2101 catcgcctgt ggcaagaccg ccttcacata tggacttatg taacccacag ccttgcacag
2161 tgtgcatgca cacacccaag actgagtcag ataatggaat gatgggacta tctccagatg
2221 catatcggtt cctcacagaa caagacagac agctaagact acttcaggca cagattcagc
2281 gtttgttgga agcacagtct ctgatgccct gttcccctaa gacaactgct gttgaagaca
2341 cagtgcaagc tggaagacaa atggagttgg tttctgtgga agcacagtct tcccctggct
2401 tgcacatgag aaaaggtgta agcattgctg tgagcacagg tgctagcttg ttttggaatg
2461 cagcaggtga ggatcaagag cctgactctc aaatgaagca agatgatacc aaaatttcca
2521 gtgaggacat gaatttttct gtcgatatta ataatgaagt cacaagtctt ccaggtagtg
2581 catcttcatt aaaagcagtt gatattccca gttttgaaga gagcaacatt gctgtggaag
2641 aagaatttaa ccagccactt tctgtatcca atggccagct ggcagaaagt gtaagcatgt
2701 gtttacagac tggaccaaca gggggtgcca gtaacaattc tgaaacatca gaggaaccaa
2761 aaattgagca tgtaatgcaa cccttgcttc atcaaccatc agataaccag aaaatttacc
2821 aggatttatt gggtcaagta aaccacctat taaatagttc ctccaaggaa actgagcagc
2881 cgtctaccaa agcagtaatt atcagtcatg aatgcaccag aacccaaaac gtttaccata
2941 caaaaaaaaa aaaaaa
//