LOCUS BC053584 2169 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens guanine deaminase, mRNA (cDNA clone MGC:61486
IMAGE:5186337), complete cds.
ACCESSION BC053584
VERSION BC053584.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580724.
FEATURES Location/Qualifiers
source 1..2169
/db_xref="H-InvDB:HIT000053927"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61486 IMAGE:5186337"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2169
/gene="GDA"
/gene_synonym="CYPIN"
/gene_synonym="GUANASE"
/gene_synonym="KIAA1258"
/gene_synonym="NEDASIN"
/db_xref="GeneID:9615"
/db_xref="HGNC:HGNC:4212"
/db_xref="MIM:139260"
CDS 184..1548
/gene="GDA"
/gene_synonym="CYPIN"
/gene_synonym="GUANASE"
/gene_synonym="KIAA1258"
/gene_synonym="NEDASIN"
/codon_start=1
/product="guanine deaminase"
/protein_id="AAH53584.1"
/db_xref="GeneID:9615"
/db_xref="HGNC:HGNC:4212"
/db_xref="MIM:139260"
/translation="MCAAQMPPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVF
LEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQYSFAGSSIDLPLLEW
LTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKF
GQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSC
SETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTV
MAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEVKIGLGTDVAGG
YSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVG
KEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVVPF
SSSV"
BASE COUNT 635 a 468 c 507 g 559 t
ORIGIN
1 gtagggagcc agcccctggg cgcggcctgc agggtaccgg caaccgcccg ggtaagcggg
61 ggcaggacaa ggccggagcc tgtgtccgcc cggcagccgc ccgcagctgc agagagtccc
121 gctgcgtctc cgccgcgtgc gccctcctcg accagcagac ccgcgctgcg ctccgccgct
181 gacatgtgtg ccgctcagat gccgcccctg gcgcacatct tccgagggac gttcgtccac
241 tccacctgga cctgccccat ggaggtgctg cgggatcacc tcctcggcgt gagcgacagc
301 ggcaaaatag tgtttttaga agaagcatct caacaggaaa aactggccaa agaatggtgc
361 ttcaagccgt gtgaaataag agaactgagc caccatgagt tcttcatgcc tgggctggtt
421 gatacacaca tccatgcctc tcagtattcc tttgctggaa gtagcataga cctgccactc
481 ttggagtggc tgaccaagta cacatttcct gcagaacaca gattccagaa catcgacttt
541 gcagaagaag tatataccag agttgtcagg agaacactaa agaatggaac aaccacagct
601 tgttactttg caacaattca cactgactca tctctgctcc ttgccgacat tacagataaa
661 tttggacagc gggcatttgt gggcaaagtt tgcatggatt tgaatgacac ttttccagaa
721 tacaaggaga ccactgagga atcgatcaag gaaactgaga gatttgtgtc agaaatgctc
781 caaaagaact attctagagt gaagcccata gtgacaccac gtttttccct ctcctgctct
841 gagactttga tgggtgaact gggcaacatt gctaaaaccc gtgatttgca cattcagagc
901 catataagtg aaaatcgtga tgaagttgaa gctgtgaaaa acttataccc cagttataaa
961 aactacacat ctgtgtatga taaaaacaat cttttgacaa ataagacagt gatggcacac
1021 ggctgctacc tctctgcaga agaactgaac gtattccatg aacgaggagc atccatcgca
1081 cactgtccca attctaattt atcgctcagc agtggatttc taaatgtgct agaagtcctg
1141 aaacatgaag tcaagatagg gctgggtaca gacgtggctg gtggctattc atattccatg
1201 cttgatgcaa tcagaagagc agtgatggtt tccaatatcc ttttaattaa taaggtaaat
1261 gagaaaagcc tcaccctcaa agaagtcttc agactagcta ctcttggagg aagccaagcc
1321 ctggggctgg atggtgagat tggaaacttt gaagtgggca aggaatttga tgccatcctg
1381 atcaacccca aagcatccga ctctcccatt gacctgtttt atggggactt ttttggtgat
1441 atttctgagg ctgttatcca gaagttcctc tatctaggag atgatcgaaa tattgaagag
1501 gtttatgtgg gcggaaagca ggtggttccg ttttccagct cagtgtaaga ccctcgggcg
1561 tctacaaagt tctcctggga ttagcgtggt tctgcatctc ccttgtgccc aggtggagtt
1621 agaaagtcaa aaaatagtac cttgttcttg ggatgactat ccctttctgt gtctagttac
1681 agtattcact tgacaaatag ttcgaaggaa gttgcactaa ttctcaactc tggttgagag
1741 gttcataaat ttcatgaaaa tatctccctt tggagctgct cagacttact ttaagctcaa
1801 acagaaggga atgctattac tggtggtgtt cctacggtaa gacttaagca aagccttttt
1861 catatttgaa aatgtggaaa gaaaagatgt tcctaaaagg ttagatattt tgagctaata
1921 attgcaaaaa ttagaagact gaaaatggac ccatgagagt atatttttat gagggagcaa
1981 aagttagact gagaacaaac gttagaaaat cacttcagat tgtgtttgaa aattatatac
2041 tgagcatact aatttaaaaa gagaacttgt tgaaatttaa aacgtgtttc taggttgacc
2101 ttgtgtttta gaaatttgca cttaatggaa tttgcatttc agagaaaaaa aaaaaaaaaa
2161 aaaaaaaaa
//