LOCUS BC053546 1550 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hydroxysteroid (11-beta) dehydrogenase 1-like, mRNA
(cDNA clone IMAGE:5732320), complete cds.
ACCESSION BC053546
VERSION BC053546.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1550)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1550)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: g Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38424084
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1550
/db_xref="H-InvDB:HIT000259278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5732320"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1550
/gene="HSD11B1L"
/gene_synonym="SCDR10"
/db_xref="GeneID:374875"
/db_xref="HGNC:HGNC:30419"
CDS 442..900
/gene="HSD11B1L"
/gene_synonym="SCDR10"
/codon_start=1
/product="hydroxysteroid (11-beta) dehydrogenase 1-like"
/protein_id="AAH53546.1"
/db_xref="GeneID:374875"
/db_xref="HGNC:HGNC:30419"
/translation="MQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPY
SAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRGVTRVKAAPGPKA
ALAVIRGGATRAAGVFYPWRFRLLCLLRRWLPRPRAWFIRQELNVTAAAA"
BASE COUNT 325 a 487 c 466 g 272 t
ORIGIN
1 cgtgccctac gggagggggt gcggtcgggg acccggcagg aggcggccga gaagagagga
61 ccgtgggggc gttcgcgtgg ctcccagccc gggaccccac ccccgctgga cagtggggga
121 aactgaggcc tgagcgggcc cacacaggac catgaaggtg cttctcctca cagggctggg
181 ggccctgttc ttcgcctatt attgggatga caacttcgac ccagccagcc tccagggagc
241 gcgagtgctg ctgacagggg ccaacgctgg tgttggtgag gagctggcct atcactacgc
301 gcgtctgggc tcccacctgg tgctcactgc ccacactgag gctctcctgc agaaggcggg
361 ctggactacc tcgtgctgaa ccacatcggc ggcgccccgg ccggcacgcg agcccgcagc
421 ccccaggcaa ctcgctggct catgcaggta aactttgtga gctacgtgca actgacgtcg
481 cgggcgctgc ccagcctgac ggacagcaag ggctccctgg tggtggtgtc ctcgctgctc
541 ggccgcgtgc ccacgtcgtt ctccactccc tactcggcgg ccaagtttgc gctggacggc
601 ttcttcggct ccctgcggcg ggagctggac gtgcaggacg tgaacgtggc catcaccatg
661 tgcgtcctgg gcctccgaga tcgcgcctcc gccgccgagg cagtcagggg agtcacgagg
721 gtcaaggcgg ccccggggcc caaggcagcc ctggccgtga tccgcggcgg cgccacgcgc
781 gcggccggcg tcttctaccc gtggcgtttc cgcctgctgt gcttgctccg gcgctggcta
841 ccgcgcccgc gggcctggtt tatccgccag gagctcaacg tcacggccgc ggcagcctga
901 gcaccggggg gtgcccctcc agtcccagac ggcaatgttc ctccctccaa ctgtccctgg
961 agccagaaca ctcacagaga cacccctgag agggtggcca cagcccaaga tgaagtcatc
1021 aagacagaaa agcaaaaccg agaaaaacga cgggcacctg gaaccagtca cggcttggga
1081 ggtgcaggtg ccccgtgtta ggcgcctttg tcggggactt gcaaggcctc acctgtttgg
1141 ccatgattga tgacgtgact gcttccattt tgcagatgag gaaactaagg ctcagagagg
1201 ccacgccacc cttgagccac ccatggaccc ctctccatct cctgcctgcg cctttaagtc
1261 cctgatttat tctttccatt cattccatct gggaggaacc cccccaactc ctgccagctt
1321 cccctagctg gggtctctgg tactcttcac acctgcaggg gcgtctacac tgttcgtcta
1381 cctggtggca gggtctgagc gggaggagga gggaaagagt gtgttctgag ctggacccag
1441 cctcttgttc gagaataaaa actcttcttc tcttgcaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//