LOCUS BC053528 1189 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae), mRNA (cDNA clone MGC:61614 IMAGE:3452929), complete
cds.
ACCESSION BC053528
VERSION BC053528.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1189)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1189)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1189
/db_xref="H-InvDB:HIT000053899"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61614 IMAGE:3452929"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1189
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
CDS 107..412
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/codon_start=1
/product="SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae)"
/protein_id="AAH53528.1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
/translation="MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHL
KKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV"
BASE COUNT 371 a 200 c 250 g 368 t
ORIGIN
1 gtgttgtgct gtggggaagg gagaaggatt tgtaaacccc ggagcgaggt tctgcttacc
61 cgaggccgct gctgtgcgga gacccccggg tgaagccacc gtcatcatgt ctgaccagga
121 ggcaaaacct tcaactgagg acttggggga taagaaggaa ggtgaatata ttaaactcaa
181 agtcattgga caggatagca gtgagattca cttcaaagtg aaaatgacaa cacatctcaa
241 gaaactcaaa gaatcatact gtcaaagaca gggtgttcca atgaattcac tcaggtttct
301 ctttgagggt cagagaattg ctgataatca tactccaaaa gaactgggaa tggaggaaga
361 agatgtgatt gaagtttatc aggaacaaac ggggggtcat tcaacagttt agatattctt
421 tttatttttt ttcttttccc tcaatccttt tttattttta aaaatagttc ttttgtaatg
481 tggtgttcaa aacggaattg aaaactggca ccccatctct ttgaaacatc tggtaatttg
541 aattctagtg ctcattattc attattgttt gttttcattg tgctgatttt tggtgatcaa
601 gcctcagtcc ccttcatatt accctctcct ttttaaaaat tacgtgtgca cagagaggtc
661 acctttttca ggacattgca ttttcaggct tgtggtgata aataagatcg accaatgcaa
721 gtgttcataa tgactttcca attggccctg atgttctagc atgtgattac ttcactcctg
781 gactgtgact ttcagtggga gatggaagtt tttcagagaa ctgaactgtg gaaaaatgac
841 ctttccttaa cttgaagcta cttttaaaat ttgagggtct ggaccaaaag aagaggaata
901 tcaggttgaa gtcaagatga cagataaggt gagagtaatg actaactcca aagatggctt
961 cactgaagaa aaggcatttt aagatttttt aaaaatcttg tcagaagatc ccagaaaagt
1021 tctaattttc attagcaatt aataaagcta tacatgcaga aatgaataca acagaacact
1081 gctctttttg attttatttg tactttttgg cctgggatat gggttttaaa tggacattgt
1141 ctgtaccagc ttcattaaaa taaacaatat ttgtaaaaaa aaaaaaaaa
//