LOCUS BC053347 2400 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens myelin associated glycoprotein, mRNA (cDNA clone
MGC:61434 IMAGE:5177296), complete cds.
ACCESSION BC053347
VERSION BC053347.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: c Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18104955.
FEATURES Location/Qualifiers
source 1..2400
/db_xref="H-InvDB:HIT000053878"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61434 IMAGE:5177296"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2400
/gene="MAG"
/gene_synonym="S-MAG"
/gene_synonym="SIGLEC-4A"
/gene_synonym="SIGLEC4A"
/db_xref="GeneID:4099"
/db_xref="HGNC:HGNC:6783"
/db_xref="MIM:159460"
CDS 91..1971
/gene="MAG"
/gene_synonym="S-MAG"
/gene_synonym="SIGLEC-4A"
/gene_synonym="SIGLEC4A"
/codon_start=1
/product="myelin associated glycoprotein"
/protein_id="AAH53347.1"
/db_xref="GeneID:4099"
/db_xref="HGNC:HGNC:6783"
/db_xref="MIM:159460"
/translation="MIFLTALPLFWIMISASRGGHWGAWMPSSISAFEGTCVSIPCRF
DFPDELRPAVVHGVWYFNSPYPKNYPPVVFKSRTQVVHESFQGRSRLLGDLGLRNCTL
LLSNVSPELGGKYYFRGDLGGYNQYTFSEHSVLDIVNTPNIVVPPEVVAGTEVEVSCM
VPDNCPELRPELSWLGHEGLGEPAVLGRLREDEGTWVQVSLLHFVPTREANGHRLGCQ
ASFPNTTLQFEGYASMDVKYPPVIVEMNSSVEAIEGSHVSLLCGADSNPPPLLTWMRD
GTVLREAVAESLLLELEEVTPAEDGVYACLAENAYGQDNRTVGLSVMYAPWKPTVNGT
MVAVEGETVSILCSTQSNPDPILTIFKEKQILSTVIYESELQLELPAVSPEDDGEYWC
VAENQYGQRATAFNLSVEFAPVLLLESHCAAARDTVQCLCVVKSNPEPSVAFELPSRN
VTVNESEREFVYSERSGLVLTSILTLRGQAQAPPRVICTARNLYGAKSLELPFQGAHR
LMWAKIGPVGAVVAFAILIAIVCYITQTRRKKNVTESPSFSAGDNPPVLFSSDFRISG
APEKYESERRLGSERRLLGLRGEPPELDLSYSHSDLGKRPTKDSYTLTEELAEYAEIR
VK"
BASE COUNT 501 a 749 c 725 g 425 t
ORIGIN
1 actgagtcca agttgtctgg cggcttcagg tggacccaga agacgtcccc aactcaggga
61 gattcagcga tcactcactc gctgtacaga atgatattcc tcacggcact gcctctgttc
121 tggattatga tttcagcctc ccgagggggt cactggggtg cctggatgcc ctcgtccatc
181 tcggccttcg aaggcacgtg cgtctccatc ccctgccgct ttgacttccc ggatgagctg
241 cggcccgctg tggtgcatgg tgtctggtac ttcaatagcc cctaccccaa gaactacccc
301 ccggtggtct tcaagtcgcg cacccaagta gtccacgaga gcttccaggg ccgcagccgc
361 ctcctggggg acctgggcct gcgaaactgc accctcctgc tcagcaacgt cagccccgag
421 ctgggcggga agtactactt ccgtggggac ctgggcggct acaaccagta caccttctca
481 gagcacagtg tcctggatat cgtcaacacc cccaacatcg tggtgccccc agaggtggtg
541 gcaggcacgg aggtggaggt cagctgcatg gtgccggaca actgcccaga gctgcgccct
601 gagctgagct ggctgggcca cgaggggctg ggggagcccg ctgtgctggg ccggctgcgg
661 gaggacgagg gcacctgggt gcaggtgtca ctgctgcact tcgtgcccac gagggaggcc
721 aacggccaca ggctgggctg ccaggcctcc ttccccaaca ccaccctgca gttcgagggc
781 tacgccagca tggacgtcaa gtaccccccg gtgattgtgg agatgaactc ctcggtggag
841 gccatcgagg gctcccacgt gagcctgctc tgtggggctg acagcaaccc cccgccgctg
901 ctgacctgga tgcgggacgg gacagtcctc cgggaggcgg tggccgagag cctgctcctg
961 gagctggagg aggtgacccc cgccgaagac ggcgtctatg cctgcctggc cgagaatgcc
1021 tatggccagg acaaccgcac cgtggggctc agtgtcatgt atgcaccctg gaagccaaca
1081 gtgaacggga caatggtggc cgtagagggg gagacggtct ctatcttgtg ctccacacag
1141 agcaacccgg accctattct caccatcttc aaggagaagc agatcctgtc cacggtcatc
1201 tacgagagcg agctgcagct ggagctgccg gccgtgtcac ccgaggatga tggagagtac
1261 tggtgtgtgg ctgagaacca gtatggccag agggccactg ccttcaacct gtctgtggag
1321 ttcgcccctg tgctcctcct ggagtcccac tgcgcggcag cccgagacac ggtgcagtgc
1381 ctgtgcgtgg tgaagtccaa cccggagccg tccgtggcct ttgagctgcc atcgcgcaat
1441 gtgaccgtga acgagagcga gcgggagttc gtgtactcgg agcgcagcgg cctcgtgctc
1501 accagcatcc tcacgctgcg ggggcaggcc caggccccgc cccgcgtcat ctgcaccgcg
1561 aggaacctct atggcgccaa gagcctggag ctgcccttcc agggagccca tcgactgatg
1621 tgggccaaga tcgggcctgt gggcgccgtg gtcgcctttg ccatcctgat tgccatcgtc
1681 tgctacatta cccagacacg caggaaaaag aacgtgacag agagccccag cttctcggca
1741 ggggacaacc ctcccgtcct gttcagcagc gacttccgca tctctggggc accagagaag
1801 tacgagagcg agaggcgcct gggatctgag aggaggctgc tgggccttcg gggtgagccc
1861 ccagagctgg acctgagcta ttctcactcg gacctgggga aacggcccac caaggacagc
1921 tacacgctga cggaggagct agctgagtat gctgaaatcc gggtcaagtg aaggagctgg
1981 gggcagcctg cgtggctgac ccccctcagg accctcgctg gcccccactg gctgtgggct
2041 cccttcctcc caaaagtatc gggggctggg gcaggagggg agtgaggcag gtgacagtga
2101 ggtcctgggg gcctgacctc cccctccttc ccagctgccc ctccctgcca gcacccccac
2161 gccctcatta cggctcctct ctaacctcct ttaccctcat ctgtctggag gggagctctg
2221 tctgtccgtg ttatttattg ctacttcctg cctggtctcc tgcccccaca cctggccctg
2281 gggcctgtac aaaagggaca tgaaataaat gccccaaagc caaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//