LOCUS BC052995 3282 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens SAPS domain family, member 2, mRNA (cDNA clone
MGC:60338 IMAGE:6162781), complete cds.
ACCESSION BC052995
VERSION BC052995.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3282)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3282)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC052995.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749632.
FEATURES Location/Qualifiers
source 1..3282
/db_xref="H-InvDB:HIT000053865"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60338 IMAGE:6162781"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3282
/gene="SAPS2"
/gene_synonym="dJ579N16.1"
/gene_synonym="SAP190"
/db_xref="GeneID:9701"
/db_xref="HGNC:HGNC:19253"
/db_xref="IMGT/GENE-DB:19253"
/db_xref="MIM:19253"
CDS 369..3086
/gene="SAPS2"
/gene_synonym="dJ579N16.1"
/gene_synonym="SAP190"
/codon_start=1
/product="SAPS2 protein"
/protein_id="AAH52995.1"
/db_xref="GeneID:9701"
/db_xref="HGNC:HGNC:19253"
/db_xref="IMGT/GENE-DB:19253"
/db_xref="MIM:19253"
/translation="MFWKFDLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKL
LDFLCRQQCMEELLTCDVPQISDRLGGDESLLSLLYDFLDHEPPLNPLLASFFSKTIG
NLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPAGLRQDVLHWLN
EEKVIQRLVELIHPSQDEDRQSNASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESQ
DCVEQLLKNMFDGDRTESCLVSGTQVLLTLLETRRVGTEGLVDSFSQGLERSYAVSSS
VLHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSI
NQELCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILSHAAREERTEASGSESRVEP
PHENGNRSLETPQPAASLPDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNM
GHLTRIANAVVQNLERGPVQTHISEVIRGLPADCRGRWESFVEETLTETNRRNTVDLA
FSDYQIQQMTANFVDQFGFNDEEFADQDDNINAPFDRIAEINFNIDADEDSPSAALFE
ACCSDRIQPFDDDEDEDIWEDSDTRCAARVMARPRFGAPHASESCSKNGPERGGQDGK
ASLEAHRDAPGAGAPPAPGKKEAPPVEGDSEGAMWTAVFDEPANSTPTAPGVVRDVGS
SVWAAGTSAPEEKGWAKFTDFQPFCCSESGPRCSSPVDTECSHAEGSRSQGPEKAFSP
ASPCAWNVCVTRKAPLLASDSSSSGGSHSEDGDHKAASAMDAVSRGPGREAPPLPTVA
RTEEAVGRVGCADSRLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPA
VSSALAVAVPLGPIMAVTAAPAMVATLGTVTKDGKTDAPPEGAALNGPV"
BASE COUNT 759 a 944 c 983 g 596 t
ORIGIN
1 cggacgcgtg ggcgatcgga gtgccgcccg cggccccgag tcggtctcga gccgccggcc
61 ggccgtgccg gtgtccgtag gcgctgcgcc ctcggccggg cccatgtgtg tgcggcccgc
121 ccgaggccgc ccgggctttg cctccaccag cgccctggcc tccgctcggg cctccacacg
181 ggcctccgaa gagctgccgc gacgcccggc ccgcagggca ggtaaagaga ttataaatct
241 tccactgaat gaaaaaaatt ttcttaaagc tgcatatact ccaagaaaaa aaccacaaat
301 gtttttctgt tttgcctgaa tacatgattt aaacaagaga tttccacaga agctctgcgg
361 ccgtcacgat gttctggaag tttgacttga acaccacgtc ccatgttgac aagctgctgg
421 acaaggagca tgtgacgctg caggagttaa tggatgaaga tgacatcttg caggagtgta
481 aggctcagaa ccagaagctg ctggacttcc tgtgcaggca gcagtgcatg gaggagcttc
541 tgacttgtga tgtgccgcag atcagcgacc gcctcggtgg ggacgagagc ctgctgagcc
601 tcctgtacga cttcttggac catgagccgc ctctcaatcc tctgctcgcc agttttttca
661 gcaagaccat tggcaatctc attgcaagaa aaaccgaaca ggtgattacg tttttgaaga
721 agaaggacaa gttcatcagc ctggtgttga agcacatcgg cacctcagcg cttatggacc
781 tgctgctgcg cctggtcagc tgtgtggagc cagccgggct ccggcaggac gtcctgcact
841 ggctgaatga agagaaggtc atccagaggc ttgtggagtt gatccacccg agccaggatg
901 aagataggca gtcaaatgct tctcagactc tctgtgacat agttaggctg ggcagagacc
961 agggcagtca gctgcaagag gctctggagc cagacccgct cctcacagcg ctggagtcgc
1021 aggactgtgt ggagcagctt ctgaagaaca tgtttgatgg agaccggacg gagagctgcc
1081 tcgtcagtgg gactcaggtg ttactcacct tgctggaaac caggcgggtt gggacagagg
1141 gcttggtgga ctccttttct cagggactgg aaaggtcata cgctgtcagc agcagcgtac
1201 tacacggcat cgagcctcgg ctgaaggact tccaccagct cctgctcaac ccgcccaaga
1261 agaaagcgat cctgaccacc attggtgtgc tggaggagcc cctggggaat gcccgtctgc
1321 atggcgcccg cctcatggca gcactgctgc acacaaacac acccagcatc aaccaggagc
1381 tctgccggct caacacgatg gacttactgc tggacttgtt ctttaagtac acctggaata
1441 actttttgca cttccaagtg gaactatgca tagccgctat tctctcccac gctgcccgtg
1501 aggagaggac agaagccagc ggatccgaga gcagggtgga gcctccgcat gagaacggga
1561 accggagcct ggagactccc cagccggccg ccagcctccc tgacaacaca atggtgaccc
1621 acctgttcca gaagtgctgc ctggtgcaga ggatcctgga ggcctgggaa gccaacgacc
1681 acacgcaggc agcgggtggc atgagacgtg ggaacatggg ccacctcaca cggatcgcca
1741 acgcggtggt gcagaacctg gagcggggcc ctgtgcagac gcacatcagc gaggtcatcc
1801 gagggctccc tgcggactgc cgtggccgct gggagagctt cgtggaggag acgctgacgg
1861 agacgaaccg caggaacact gtggacctgg ccttctctga ctaccagatc cagcagatga
1921 cagccaactt cgtggatcag tttggcttca atgatgagga gtttgccgac caggacgaca
1981 acatcaatgc cccgtttgac aggatcgcag agatcaactt caacatcgac gctgacgagg
2041 acagtcccag cgcagctctg tttgaggcct gctgcagtga ccgcatccag ccctttgatg
2101 atgatgagga cgaggacatc tgggaggaca gtgacactcg ctgtgctgcc cgggtgatgg
2161 ccagacccag gtttggagcc ccccatgctt cagagagttg ctcaaagaat ggcccagagc
2221 gtggaggcca ggatgggaag gcgagcttgg aagcacacag agatgcacct ggggcaggtg
2281 ccccaccggc ccccgggaag aaggaagccc cccctgtgga gggtgactca gaaggcgcca
2341 tgtggacggc agtgtttgat gagccagcga actcaacgcc cacagcccca ggagtggtga
2401 gggacgtggg ttccagtgtg tgggcagctg gcacctcagc tccagaggag aaaggctggg
2461 ccaagttcac tgacttccaa cctttctgct gctccgagtc agggcccagg tgcagctctc
2521 cggtggacac agaatgcagc catgctgagg gcagccggag ccaaggccct gagaaagcct
2581 tcagcccggc ttctccatgt gcctggaacg tgtgtgtcac caggaaggcc cccctgctgg
2641 cctctgacag tagctcctct gggggctccc acagcgagga tggcgaccat aaggcagcga
2701 gtgccatgga tgcggtgagc aggggtcccg gccgggaggc ccccccgctg cccacagtgg
2761 ccaggacaga ggaggcggtc ggcagggtcg ggtgtgctga cagccggctg ttaagccctg
2821 cctgccccgc gccaaaggaa gtgactgctg ccccagccgt ggctgtgccc cccgaggcta
2881 ctgtggccat caccacagca ctgagcaagg ctggccccgc catacccacc ccagcagtct
2941 cttctgcact ggccgtggcg gtccccctag ggcccatcat ggcagtcaca gcagccccag
3001 ccatggtggc caccctgggg acagtgacaa aggacgggaa gacagatgcc ccgccagaag
3061 gagctgcctt aaatggccca gtgtgatgct gctgccgccc ggccacggcc caccctggtc
3121 aggctgcctc cttaatcgag aaaactacct ggtgatgcaa tctttttttt tttaatttaa
3181 tttaatttta aaataaatgc tgcattggta aagctggcag ttgaaaccag aaaaaaaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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