LOCUS BC052989 1343 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dexamethasone-induced transcript, mRNA (cDNA clone
MGC:60202 IMAGE:6194689), complete cds.
ACCESSION BC052989
VERSION BC052989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1343)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1343)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33620720.
FEATURES Location/Qualifiers
source 1..1343
/db_xref="H-InvDB:HIT000053860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60202 IMAGE:6194689"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1343
/gene="DEXI"
/gene_synonym="MYLE"
/db_xref="GeneID:28955"
CDS 129..416
/gene="DEXI"
/gene_synonym="MYLE"
/codon_start=1
/product="dexamethasone-induced transcript"
/protein_id="AAH52989.1"
/db_xref="GeneID:28955"
/translation="MLGARVAAHLDALGPLVPYVPPPLLPSMFYVGLFFVNVLILYYA
FLMEYIVLNVGLVFLPEDMDQALVDLGVLSDPGSGLYDADSELDVFDAYLE"
BASE COUNT 334 a 383 c 346 g 280 t
ORIGIN
1 cccggccctg cttctgtcgg gctccagggt acccctggat ggctgcgctg tgccctcgcc
61 ggccgcccgg gcgccgcagc ggctgagttc gccgggatcg ccgggccgcc gcccttgcca
121 cccgctgcat gctcggcgcc cgggtcgcgg cccacctgga cgcactgggc cccctggtcc
181 cctacgtgcc gccgccgctg ctgccctcta tgttctacgt gggcctgttc ttcgtcaatg
241 tgctgatcct gtactacgcc ttcctcatgg agtacatcgt cctcaacgtg ggcctcgtct
301 tcctgcccga ggacatggac caggcgctcg tggacctcgg cgtgctctcc gaccccggct
361 cgggccttta cgatgctgac tcggagctcg acgtctttga tgcgtacttg gagtagggtc
421 tcgactgctg ttcccctctt ccctacacga tccgcaaccc atgccctgga ccagccgccc
481 agatcatgcc gccgcagctg gttgggggca ccatctggac ggggatggtt ccccaggagg
541 agaccctccc ctgcctccga ggcctacctg ctcccctcaa aagcttcgtg ccaacagaga
601 ggttcctgtt tgaacccagg agagtggaag agagattggg actgagtgct gaggttggga
661 aggcacctgc tcccacagaa gggggaacgc aagaggcatc ccaagacctc atctgcctgc
721 agtgtcaaat cgatggcctg gccttggctt ctgattattt gcagctgcga tggatgttta
781 caggaaccca gccagagttt gcctccctgc acttcatccc ggagcgcacc tgcttccccc
841 acttcacctt cggagaggac acttcaaact gcggacacac gcaaaagcga ctcccagctc
901 cgtttgatgt gagttgagcc ttcaggccag ctgggtttag cccgaggctg gtcttagatg
961 cagcgactgt ttcaggggtg actcagaaga aaaagaagct gaggaagctg ttggggggct
1021 gagggtggga ttctcgctcc ttcatttcag gttactcgtt cttcagcaag ttggcaaaac
1081 agacatcatg ctggtgagtg ccacgttact cccctggctg gaaatgcttt tctgaaagta
1141 tgagtgttgt gcctacttaa ttctgataaa cccttctaag caatacttag gaggcttact
1201 tctttggatt aaaaaaaaat gtatgcaact ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaa
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