LOCUS BC052950 4222 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens G protein regulated inducer of neurite outgrowth 1,
mRNA (cDNA clone MGC:43428 IMAGE:5267189), complete cds.
ACCESSION BC052950
VERSION BC052950.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4222)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698770.
FEATURES Location/Qualifiers
source 1..4222
/db_xref="H-InvDB:HIT000053835"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43428 IMAGE:5267189"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4222
/gene="GPRIN1"
/gene_synonym="GRIN1"
/gene_synonym="KIAA1893"
/db_xref="GeneID:114787"
/db_xref="HGNC:HGNC:24835"
CDS 176..3202
/gene="GPRIN1"
/gene_synonym="GRIN1"
/gene_synonym="KIAA1893"
/codon_start=1
/product="G protein regulated inducer of neurite outgrowth
1"
/protein_id="AAH52950.1"
/db_xref="GeneID:114787"
/db_xref="HGNC:HGNC:24835"
/translation="MDTAEDPAWLQLLQKDSSPPGPRPTAFFCPQDGSLGAGSSAMRD
YCPSQQKASPAPPRHTPDQSPGMESRHRSPSGAGEGASCSDGPRGSLACPSPTCFSPQ
ESPSKETLEAHGASISGTTEATTSGKPEPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQ
ADSTSIGKEDPGSSRKADPMFTGKAEPEILGKGDPVAPGRMDPMTVRKEDLGSLGKVD
PLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDPVFPRKEEPRYSGKEHPVSSEKVAPT
SAEKVDLVLSGKRDPGPSGKADPVPLESMDSASTGKTEPGLLGKLIPGSSGKNGPVSS
GTGAPGSLGRLDPTCLGMADPASVGNVETVPATKEDSRFLGKMDPASSGEGRPVSGHT
DTTASAKTDLTSLKNVDPMSSGKVDPVSLGKMDPMCSGKPELLSPGQAERVSVGKAGT
VSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSA
VKAEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQ
GDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKADP
RASGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDPGSCRKAEPLA
SGKGEPVSLGKADSAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDRKALGSARSPEG
ARGSEGRVEPKAEPVSSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAP
SWEASAPPPPREDAGTQAGAQACVSVAVSPMSPQDGAGGSAFSFQAAPRAPSPPSRRD
AGLQVSLGAAETRSVATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEPAEPVRDVS
WDEKGMTWEVYGAAMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRSGSVR
TAPPDGAAKRPPGLFRALLQSVRRPRCCSRAGPTAE"
BASE COUNT 890 a 1304 c 1326 g 702 t
ORIGIN
1 acggcggcgc cgagtctgcg ggtcctcccg ccagcccggc cggaggcagc cgaggccgct
61 cgggcggcgg cggcggcggc ggcgggagcc ggagcgcatc tcgcccagga gccggagcag
121 cggcactgcc tgaaccagac agcagccttg ggtgcaggcg tggtcatgag ggcagatgga
181 cactgctgaa gacccggcct ggctccagct gcttcaaaag gattccagcc ccccaggacc
241 ccgacccaca gccttcttct gcccacagga tgggagcctg ggggctggca gctcggctat
301 gagggattac tgcccctccc agcaaaaggc aagccctgca ccccccaggc acacccctga
361 ccaaagccca ggcatggagt ctagacacag aagccccagt ggggctgggg aaggggcctc
421 ctgctctgac ggccccagag ggagcctggc ctgcccctcc ccaacctgct tctctcccca
481 ggagtcaccc tccaaggaga cattggaggc acatggagcc tccatctcag ggacaacaga
541 agccaccacg tctgggaagc cagagcctgt gtcctccgtg aaaactgagc ccaaatcctc
601 agatgacaga aatcccatgt tcttagagaa gatggatttc aagtcctcaa agcaggccga
661 ttccacttcc ataggaaagg aggatcctgg gtcctcacgg aaggcagatc ccatgtttac
721 aggaaaggca gagcctgaaa tcttgggaaa gggggatcct gtggctcctg gaaggatgga
781 tcccatgact gtaagaaagg aagatcttgg atccctggga aaagtagatc ctttgtgctc
841 cagcaagacg tatacagtgt caccgaggaa ggaggatcct gggtctttga gaaaggtgga
901 tcctgtgtcc tcagacaaag tggaccctgt attcccaaga aaggaggagc ccaggtattc
961 aggaaaagag catcctgtgt cctcagaaaa ggtcgctcct acatctgcag aaaaggtaga
1021 tcttgtattg tcgggaaaga gagatcctgg gccctcggga aaggcagatc ccgtgccctt
1081 ggaaagcatg gattctgcgt ccacaggaaa gacagagccg gggctcctgg gcaagctgat
1141 tccaggctca tcaggcaaga atgggcctgt atcctctggg accggggctc ctgggtcctt
1201 gggaaggctg gatcccacat gcttggggat ggcagatccc gcatctgtgg gaaatgtaga
1261 aactgtgcct gccacaaaag aggactcccg gttcctggga aagatggacc ctgcctcctc
1321 aggagagggg cgtcctgtgt ctggccacac ggatactacg gcttcagcaa agacagatct
1381 cacatctttg aaaaatgtgg atcccatgtc ttcaggcaag gtggatccag tttctctggg
1441 aaagatggac cccatgtgct caggaaagcc agagctcttg tctcctggac aggcagagcg
1501 tgtgtctgtg ggaaaggcag gaactgtatc cccaggaaaa gaggacccgg tgtcctccag
1561 aagggaggac cccatatctg ctggaagtag aaagacatca tctgaaaaag tgaatcctga
1621 gtcttcagga aagacaaacc ctgtgtcttc aggtccaggc gatcccaggt ccttggggac
1681 agcaggtccc ccatctgcag taaaggctga gccagcgaca gggggaaaag gagatcccct
1741 gtcctcggag aaggcaggtc tggtggcctc tggaaaggcg gctcccacag cctcagggaa
1801 ggccgagccc ctcgcggtgg gcaaggagga ccctgtgagc aagggaaagg cagacgctgg
1861 cccctctgga caaggggact ctgtgtctat aggtaaagtg gtctcaactc caggaaaaac
1921 agtcccggtg ccctcgggga aggtggatcc cgtgtccctg ggaaaagcag aagctatccc
1981 agagggaaaa gtgggttctc tgcctctaga gaaggggagt cctgttacca ccacaaaggc
2041 ggatcccagg gcctcgggga aagcacagcc gcagtctggt ggcaaagcag aaacaaagct
2101 ccctgggcaa gagggcgctg cagcaccagg agaagcaggg gctgtgtgtt tgaaaaagga
2161 gacaccacag gcctcagaga aggtggatcc tggatcctgc agaaaagcag agccccttgc
2221 ctcagggaag ggagagcctg tgtccctggg gaaagccgac tctgcacctt ccagaaaaac
2281 ggagtcccca tccttgggga aggtggtccc cctgagtctg gagaagacca agccgtcctc
2341 ctcctccagg cagttagacc gcaaagccct cggctcagcc cggtctcccg agggtgccag
2401 gggcagtgaa ggccgcgtgg agccgaaggc cgagcccgtg tccagcaccg aggcctccag
2461 tctcggccag aaagacctgg aagccgctgg ggccgagaga agcccctgcc cagaggccgc
2521 agcgcccccg ccggggccgc ggactcgcga caacttcacc aaggcgccgt cgtgggaggc
2581 gagcgccccg ccgccgccgc gcgaggacgc gggcactcag gcgggcgcgc aggcctgcgt
2641 ctcagtggcc gtgagcccca tgtctccgca ggacggcgct gggggctcgg ccttcagctt
2701 ccaggcggcg ccgcgcgcgc ccagcccgcc ctcgcgccga gatgcgggcc tgcaggtgtc
2761 gctgggcgcc gccgagacgc gctcagtggc cactgggccc atgacacctc aagccgccgc
2821 gccgcccgcc ttccccgaag tgcgggtgcg gcccggctca gcgctggcgg ccgctgtagc
2881 gcccccggag ccggctgagc ccgtgcgaga cgtgagctgg gacgagaagg gcatgacgtg
2941 ggaggtatac ggcgccgcca tggaggtgga ggtgctgggc atggccatcc agaagcatct
3001 ggagcgacag atcgaggagc acggccgcca aggggcgccc gcgccgccgc ccgccgcccg
3061 tgccggcccc ggccgttcgg gctcggtgcg caccgcgccc ccagatggcg ccgccaagcg
3121 tccgcccggc ctgttccgcg cgctgctgca gagtgtgcgc cggccgcggt gctgctcgcg
3181 ggcgggaccc acggccgagt gatctgcccc cattttgtac gcccgagttt ccgaccttct
3241 caggctccct tcttgatcac aggcccctag aaggggtccc ctctgcgtgc cacaggcctc
3301 cgaggggttg tgcagcctct agggctgttg cgtccccgtc tttccagccc ctcccatcac
3361 aaatacagaa gaaccccttc taccaagctc cctcgtggcc acgaggccac gaacccggcc
3421 agccctgacg ccccactgtc ccctcacagc cctcagctct actcccggtc acactgggcg
3481 accacggggg cctgctcagc accctcacct cccaccccct gagagctggg gcaggctcct
3541 gagatgtcta gactggtgcg ttgtggtctc cggtggggcc agatccccag aacagggaga
3601 gactgcatac aagtctgagt ggcagaagct tcaagtgggt gaggatcggt gtgtgagacc
3661 cgcgagtggg cacgtctctg aatgtgaggt ctcgggcagc acgtgaggta gaacgagtgt
3721 gagcgtctcc acgcagtggc tggccccgtg gccggggcgt ctcttgcatg ctgttggtgg
3781 tccttcccca gttcctatct cccacccgcc tggttccagc cccatcccct ctcccactga
3841 gtcacaggtt tgagattccc agagaggcca aagacagcta caggaagtac cctgggggct
3901 cagctgagag agagtcacag aaaggccaga gggtctcagg aaggtctgga ggtcacagct
3961 gggctcacag aagctcttgg gccctggcat cctgggtgac cggtgttctt gggtattggg
4021 gacaggacag agagctcatt ctataaccac agttgtcttt taaaggccac cctctccagc
4081 cccttgtccc ccctgtgctg tgagcccaag tcccttgtga ccactcagtg tcccgtcccc
4141 acccctccag ccgcagtttt tggctacaaa ctgtcacagt atacattggt aataaaatat
4201 ttccccaaaa aaaaaaaaaa aa
//