LOCUS BC052809 936 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone
IMAGE:6151125), partial cds.
ACCESSION BC052809
VERSION BC052809.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 936)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: l Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503178.
FEATURES Location/Qualifiers
source 1..936
/db_xref="H-InvDB:HIT000259221"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6151125"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>936
/gene="OFD1"
/gene_synonym="71-7A"
/gene_synonym="CXorf5"
/gene_synonym="OFD-1"
/db_xref="GeneID:8481"
/db_xref="MIM:300170"
CDS 217..>936
/gene="OFD1"
/gene_synonym="71-7A"
/gene_synonym="CXorf5"
/gene_synonym="OFD-1"
/codon_start=1
/product="OFD1 protein"
/protein_id="AAH52809.1"
/db_xref="GeneID:8481"
/db_xref="MIM:300170"
/translation="MMAQSNMFTVADVLSQDELRKKLYQTFKDRGILDTLKTQLRNQL
IHELMHPVLSGELQPRSISVEGSSLLIGASNSLVADHLQRCGYEYSLSVFFPESGLAK
EKVFTMQDLLQLIKINPTSSLYKSLVSGSDKENQKGFLMHFLKELAEYHQAKESCNME
TQTSSTFNRDSLAEKLQLIDDQFADAYPQRIKFESLEIKLNEYKREIEEQLRAEMCQK
LKFFKDTEIAKIKMEAKKKKKK"
BASE COUNT 295 a 187 c 224 g 230 t
ORIGIN
1 cgcgaagaaa ggaagctcgc gtgtttgcta gaaaacctag ttgggagtgc gaggcagaga
61 acgttcagca cctttgttcc tcccgaaccc tcgggacaga ggcagggttc tgagggcagg
121 gattccccct cgtcttggcc ccaccgcccg ggctgggcac taaactcggg ccgcggcggg
181 gcgagcgagg cgggctccgg agggagctga cgcctgatga tggcgcagtc caacatgttt
241 accgtggctg atgtgttgag tcaagatgaa ctgcgcaaaa agctatacca gacgtttaag
301 gatcggggta tactggatac actcaagaca caacttcgaa accagctaat tcatgagttg
361 atgcaccctg tattgagtgg agaactgcag cctcggtcca tttcagtaga agggagctcc
421 ctcttaatag gcgcctctaa ctctttagtg gcagatcact tacaaagatg tggctatgaa
481 tattcacttt ctgttttctt tccagaaagt ggtttggcaa aagaaaaggt atttactatg
541 caggatctat tacaactcat taaaatcaac cctacttcca gtctctacaa atcactggtt
601 tcaggatctg ataaagaaaa tcaaaaaggt tttcttatgc attttttaaa agaattggca
661 gaatatcatc aagctaaaga gagttgtaat atggaaactc agacaagttc gacatttaac
721 agagattctc tggctgagaa gcttcagctt attgatgatc agtttgcaga tgcttaccct
781 cagcgtatca agttcgaatc tttagaaata aagctaaatg agtataagag agaaatagaa
841 gagcaacttc gggcagaaat gtgtcaaaag ttgaagtttt ttaaagatac cgagatagca
901 aaaattaaaa tggaagcaaa aaaaaaaaaa aaaaaa
//