LOCUS BC052805 2579 bp mRNA linear HUM 08-OCT-2003 DEFINITION Homo sapiens erythrocyte membrane protein band 4.9 (dematin), mRNA (cDNA clone MGC:59859 IMAGE:6269658), complete cds. ACCESSION BC052805 VERSION BC052805.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2579) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2579) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: h Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4503580. FEATURES Location/Qualifiers source 1..2579 /db_xref="H-InvDB:HIT000053829" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59859 IMAGE:6269658" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2579 /gene="EPB49" /gene_synonym="DEMATIN" /gene_synonym="DMT" /db_xref="GeneID:2039" /db_xref="MIM:125305" CDS 314..1465 /gene="EPB49" /gene_synonym="DEMATIN" /gene_synonym="DMT" /codon_start=1 /product="EPB49 protein" /protein_id="AAH52805.1" /db_xref="GeneID:2039" /db_xref="MIM:125305" /translation="MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDL AAIPKDKAILDIERPDLMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWAD SRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTK HLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEE EEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPF HTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQIYPYEMLVVTNKGRT KLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF" misc_feature 1355..1462 /gene="EPB49" /gene_synonym="DEMATIN" /gene_synonym="DMT" /note="VHP; Region: Villin headpiece domain" /db_xref="CDD:smart00153" BASE COUNT 569 a 830 c 701 g 479 t ORIGIN 1 gtgaccttgt ggggaaagga gccaagaacg gggcgtcggg gggcctggga cccccctgcc 61 tgagagatac aggaatcctg gccccgtgtt gtggacacaa gcgcccatcc tcaaggtcct 121 gagaactcct gaacttccaa agcctggaga gtcaccgccg agggatgagg acgcgccagc 181 ccgggggaac gcgccagctg ctttcgcggc cccaagcgcg cagtgcccag cagccgcgcc 241 gagcctgaca cgctgtcctc tcccctcgcg cacagggctc tgcgagtgac ccggcgggcg 301 agctccgtgc tgcatggaac ggctgcagaa gcaaccactt acctcccccg ggagcgtgag 361 cccctcccga gattccagtg tgcctggctc tccctccagc atcgtggcca agatggacaa 421 tcaggtgctg ggctacaagg acctggctgc catccccaag gacaaggcca tcctggacat 481 cgagcggccc gacctcatga tctacgagcc tcactttact tattccctcc tggaacacgt 541 ggagctgcct cgcagccgcg agcgctcgct gtcacccaaa tccacatccc ccccaccatc 601 cccagaggtg tgggcggaca gccggtcgcc tggaatcatc tctcaggcct cggcccccag 661 aaccactgga accccccgga ccagcctgcc ccatttccac caccctgaga cctcccgccc 721 agattccaac atctacaaga agcctcccat ctataagcag agagagtccg tgggaggcag 781 ccctcagacc aagcacctca tcgaggatct catcatcgag tcatccaagt ttcctgcagc 841 ccagccccca gaccccaacc agccagccaa aatcgaaacc gactactggc catgcccccc 901 gtctctggct gttgtggaga cagaatggag gaagcggaag gcgtctcgga ggggagcaga 961 ggaagaggag gaggaggaag atgacgactc tggagaggag atgaaggctc tcagggagcg 1021 tcagagagag gaactcagta aggttacttc caacttggga aagatgatct tgaaagaaga 1081 gatggaaaag tcattgccga tccgaaggaa aacccgctct ctgcctgacc ggacaccctt 1141 ccatacctcc ttgcaccagg gaacgtctaa atcttcctct ctccccgcct atggcaggac 1201 caccctgagc cggctacagt ccacagagtt cagcccatca gggagtgaga ctggaagccc 1261 aggcctgcag atctatccct atgaaatgct agtggtgacc aacaaggggc gaaccaagct 1321 gccaccgggg gtggatcgga tgcggcttga gaggcatctg tctgccgagg acttctcaag 1381 ggtatttgcc atgtcccctg aagagtttgg caagctggct ctgtggaagc ggaatgagct 1441 caagaagaag gcctctctct tctgatggcc cccacctgct ccgggacggc ccccttaccc 1501 ctgctgcttc agggtttttc cccggcgggt tgggaggggc aggaggtggg gtggaaatag 1561 ggtgggctcc tttcctcagg tagagtgggg ggccaaaacc tctgcagtcc ccggcagtga 1621 gctatggact ttcttccccc tcacaaggct gggggcctcc tgctctcgtc cctggccctc 1681 cctgcacagg gcaaagccag tctgggctct ggcacacaga gttcatgttt gcgccctctc 1741 cctgcccctc accccagagg gtgaggagga atgaggggca ttggtggtta ggccggttgg 1801 ctgtcttgaa cagctggagg gaagatgcag gggtgggaag cggccaggca gaaagagctc 1861 caggctcttg tgtcgcccac ccagccctcc catactcact cctgacagct ttcctgcact 1921 gcagcttcct gctcctctga ctctagtggg aacaggcccc agctcagcct ccggcaggga 1981 ggtcacccct ccacttcagc ttgccctgac ctccgctcgc aaaccccgag cttccaagcc 2041 ttttgctcca gccctgcggc ttccccagaa gcctgggctt agggtggaga tgccgcctac 2101 acacgatcct ggccctccac ctgcctccag gccacgaaat gggaattcca gcactaagcc 2161 aggcaccggg cagaagctgg gccttccgcc tcccttggat ggggtcaaga ggccaggcct 2221 ggcacatttt ggagtgtcct ggctaccagc tctcacctac acccacgcac ccccccacac 2281 actatgctct ctcaagaatg taatttattg gggccccccc agctgctttc ctcacctgcc 2341 cctgccctac cttacacccc cagcttgact tctttccagt ccacgtgtgt atataatgat 2401 atctatattt ttgcccaggt ctgggtattg ctcctgccca gaccctgaca tccctttcca 2461 ctgtgtgtgt gaccatgctg ggggaggggg actctgcttg gaattaaaag gttgcattgg 2521 gtccctaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //