LOCUS BC052642 1059 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 1,
alpha 220kDa, mRNA (cDNA clone IMAGE:6138423), partial cds.
ACCESSION BC052642
VERSION BC052642.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1059)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1059
/db_xref="H-InvDB:HIT000099546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6138423"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1059
/gene="GTF3C1"
/gene_synonym="TFIIIC"
/gene_synonym="TFIIIC220"
/gene_synonym="TFIIICalpha"
/db_xref="GeneID:2975"
/db_xref="MIM:603246"
CDS <1..411
/gene="GTF3C1"
/gene_synonym="TFIIIC"
/gene_synonym="TFIIIC220"
/gene_synonym="TFIIICalpha"
/codon_start=1
/product="GTF3C1 protein"
/protein_id="AAH52642.1"
/db_xref="GeneID:2975"
/db_xref="MIM:603246"
/translation="ERDCESVCFIGRPWRVVDGHLNLPVCKGMMEAMLYHIMTRPGIP
ESSLLRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTPVVEEVEVPSSL
DESPMAFYEPTLDCTLRLGRVFPHEVNWNKWIHL"
BASE COUNT 190 a 336 c 299 g 234 t
ORIGIN
1 gaaagggact gtgagagtgt ctgcttcatc ggccggccgt ggcgtgtcgt ggatggccac
61 ctgaaccttc ctgtatgcaa gggtatgatg gaggccatgc tgtaccacat catgaccagg
121 cctggcatcc ccgagagctc cctgctgcgc cactaccagg gggtcctgca gcccgtcgcc
181 gtgctggagt tgctccaggg cctggagtcc ctcggctgca tccggaagcg ctggctgaga
241 aagccaaggc ctgtctcgct cttctctaca cccgtggtgg aagaggtgga agtgccctcc
301 agcctggacg agagccccat ggctttctat gagcccacct tggactgtac cctccggctg
361 ggccgtgtgt tcccccacga ggtcaactgg aacaagtgga tccacctcta ggacccctgt
421 gggcgtcccc tccctcccag ccaccgcctg ccgagcctcc tgcagcaggg gacgggtgct
481 ttggccagag tcacagactg acacgtttcc cactgtactg gaactctgga aagaggggct
541 ccccgacctg cccatccccc aggctcttct gggccttccc cttgggaact ggcctcatca
601 cactgggagt tggtgcttct tgtctctggg tctccagagt ttgccccgcc tgtgcacacc
661 tcacattcca gactctagcc atctcggcag gatctcctgg ctccttgagt gcccaggtgc
721 caccaagagg aagggccttg tgggatacac cttgcagaat agggatcggt gtgccccgct
781 gcgaggggcc ccccatgggg gctgtggccc ctccgcaggc aggacatccc aacccctggc
841 tgggactgaa ccacccagag cggagcggct cccttttcag ccttgtgagt cacctggcag
901 gccccagctg ggctggctgt ccgtgtccct cagcctggct ggtgattcct tgcaggccag
961 aaatgaagag tccctgtagg ttttggtttt gtttgtttta ttttgttctt tcaccttttt
1021 tcctcattaa aaaaaaaaag tcccaaaaaa aaaaaaaaa
//