LOCUS BC052638 949 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 18, mRNA (cDNA
clone IMAGE:6162181), partial cds.
ACCESSION BC052638
VERSION BC052638.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 949)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 949)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18699723.
FEATURES Location/Qualifiers
source 1..949
/db_xref="H-InvDB:HIT000259207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6162181"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>949
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
CDS 181..>949
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/codon_start=1
/product="SFRS18 protein"
/protein_id="AAH52638.1"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKKKKKKK"
BASE COUNT 306 a 227 c 227 g 189 t
ORIGIN
1 gaagcatcga aagcgttgga gaggtgttac cggaacggcg gcgacaaggg tgttcccgaa
61 ctagagtggg gcatacataa tcttgctgct atgcttcgaa gctgtagtct gaatcaacct
121 aagttttaaa cagaaggtga acctctgaga tagaaaatca agtatatttt aaaagaaggg
181 atgtgggatc aaggaggaca gccttggcag cagtggccct tgaaccagca acaatggatg
241 cagtcattcc agcaccaaca ggatccaagc cagattgatt gggctgcatt ggcccaagct
301 tggattgccc aaagagaagc ttcaggacag caaagcatgg tagaacaacc accaggaatg
361 atgccaaatg gacaagatat gtctacaatg gaatctggtc caaacaatca tgggaatttc
421 caaggggatt caaacttcaa cagaatgtgg caaccagaat ggggaatgca tcagcaaccc
481 ccacaccccc ctccagatca gccatggatg ccaccaacac caggcccaat ggacattgtt
541 cctccttctg aagacagcaa cagtcaggac agtggggaat ttgcccctga caacaggcat
601 atatttaacc agaacaatca caactttggt ggaccacccg ataattttgc agtggggcca
661 gtgaaccagt ttgactatca gcatggggct gcttttggtc caccgcaagg tggatttcat
721 cctccttatt ggcaaccagg acctccagga cctccagcac ctccccagaa tcgaagagaa
781 aggccatcat cattcaggga tcgtcagcgt tcacctattg cacttcctgt gaagcaggag
841 cctccacaaa ttgacgcagt aaaacgcagg actcttcccg cttggattcg cgaaggtctt
901 gaaaaaatgg aacgtgaaaa gcagaaaaaa aaaaaaaaaa aaaaaaaaa
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