LOCUS BC052619 2649 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens coatomer protein complex, subunit epsilon, mRNA (cDNA
clone IMAGE:6580357), with apparent retained intron.
ACCESSION BC052619
VERSION BC052619.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: n Column: 4
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2649
/db_xref="H-InvDB:HIT000099540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6580357"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 553 a 794 c 788 g 514 t
ORIGIN
1 ccagtgggag ggtgggtgag gccacgcctg tcctgcccct gagccacagg ccagcgttgg
61 tcaaacgccc atgggcggca gccaagggga gagggggctg ggctgtgggg acccaggaac
121 cttgccccct cctgctgtgg ggtcggagtg agggtctggc atggggagac tgctgtgatc
181 ctgctcttcc ttggcccacg gaggcagtgt cccaactacc gcctcccttc actcaaagaa
241 acctggggtt cctgggagct gactcctgtg cagaggcagc atggtggggt gaatggtgtc
301 ccccaaaagg tacgtccata tcctatccca catgcttgtg aatatgatat catttggaaa
361 aagggtcttt gccgatcaga ttaagagata aggagatgaa gacatgctgg atttagggtg
421 ggccccaaag ccaaggactt gtgtcctttt aagagataaa aggagggctg ggtgcagtgg
481 ctcatacttg taatcccagc actttgggag gacgaggtgg gcagatcacc tgaggtcagg
541 agttttcaag accagcctgg ccaacgtggt gaaaccccat ttctattaaa aatacagaat
601 taacaggatg tgatgtctgt agtcccaagt agttgggact acaggcgcca ccaggcccag
661 ctgactttct tacttttttg tagaaaaagg ggtcctacta tgttgcccag ggtggtcttg
721 aactcctggg cttaagcgat cctgccttgg cctcccaaag cgctggggtt acgggtgtga
781 gccacagtac ccggccccat tggtaattgt aacaccttag gatgacaaca ttacagtacc
841 aacgctacga caactggcag tgtttataca cccttgtgtg ctggagcctc aggaagcttt
901 gtaagatggt cttgggagct ccttgctcct cccctgcatg atccctgtaa catggtccct
961 cagcacgggg aaacagactc agacctgaag tcacttgtct gttggacctg gcactgtggc
1021 gagccctcag tggagcctgg ttggtatcag acatgccatg ccctcagtga cacctcagac
1081 acgggccctg ggcagacagc ccccagatgc gcgtggatgc ttacggggtc acagagccac
1141 gtttgaaccc agaagaacac cagctttggt ctagggtggc cccctcacct gccttctctt
1201 tttagctgct caatagccat ggggaatgga gggtctgggt ccagttaggg acatggaggc
1261 atgggtgacc tgtgccctcg gagctgagcc ggtcctcagc cttgcctggg ctcaagcctg
1321 gccctggccc gcagcacact ggccatcttc agggtgcagc cagcaccctg ggctctcagg
1381 gactgagggc agctgccctg gcagtggggg tgccccaggg ctcccatcct tctgcacggc
1441 ccctcggcac ccaggccgac ctcctgctag aagacgtggc cttgaagccc acagggttga
1501 tgggttatgg tcaggagtcc cagctgggcc caccagcctc ctcaggaagg cgggtgaggt
1561 tggtgtgaga ctgacggtgc ctcctcatgt ccccttggag cgccccaccc cacatctccc
1621 ggcctcgggt ccttgcctgg cccagcatga gaggtgcttc ataggaacgg agggaggaca
1681 tgtcgggaca gctcgatgct cggcctgctg ctgctctgca cccccagggc ctggctcacc
1741 ctctctggac ctgtctgctt ccaaggaagg ggaccctctg aggtcccaca gaggccaccc
1801 cagctgtggg tcgtgagcat ctctgtcttg cagggacagc atcgtggccg agctggaccg
1861 agagatgagc aggagcgtgg acgtgaccaa caccaccttc ctgctcatgg ccgcctccat
1921 ctatctccac gaccagaacc cggatgccgc cctgcgtgcg ctgcaccagg gggacagcct
1981 ggagtgcaca gccatgacag tgcagatcct gctgaagctg gaccgcctgg acctcgcccg
2041 gaaggagctg aagagaatgc aggacctgga cgaggatgcc accctcaccc agctcgccac
2101 tgcctgggtc agcctggcca cgggtggtga gaagctgcag gatgcctact acatcttcca
2161 ggagatggct gacaagtgct cgcccaccct gctgctgctc aatgggcagg cggcctgcca
2221 catggcccag ggccgctggg aggccgctga gggcctgctg caggaggcgc tagacaagga
2281 tagtggctac ccagagacgc tggtcaacct catcgtcctg tcccagcacc tgggcaagcc
2341 ccctgaggtg acaaaccgat acctgtccca gctgaaggat gcccacaggt cccatccctt
2401 catcaaggag taccaggcca aggagaacga ctttgacagg ctggtgctac agtacgctcc
2461 cagcgcctga ggctggccca gagctgtcag gaccatgaag ccaggacaga ggccaggagc
2521 cagccctgca gccctcccca cccggcatcc acctgcatcc cctctggggg caggagccca
2581 cccccagcac ccccatctgt taataaatat ctcaactcca gggtgttcca aaaaaaaaaa
2641 aaaaaaaaa
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