LOCUS BC052611 2080 bp mRNA linear HUM 16-AUG-2008 DEFINITION Homo sapiens paxillin, mRNA (cDNA clone IMAGE:6252827), complete cds. ACCESSION BC052611 VERSION BC052611.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2080) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2080) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: h Column: 24 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2080 /db_xref="H-InvDB:HIT000053815" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6252827" /tissue_type="Skin, melanoma, melanotic" /clone_lib="NIH_MGC_112" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2080 /gene="PXN" /db_xref="GeneID:5829" /db_xref="HGNC:HGNC:9718" /db_xref="MIM:602505" CDS 264..1052 /gene="PXN" /codon_start=1 /product="PXN protein" /protein_id="AAH52611.1" /db_xref="GeneID:5829" /db_xref="HGNC:HGNC:9718" /db_xref="MIM:602505" /translation="MPDTFNSRSPSVEGSLWAVGTESQGRDWRHLPTITSELSGAPRC HTVPCAGSTALQEPGEPQGPPASPSCPEEALAATWEQPWASEVFGPERMPPSGAARSF QEVTEPAVVAVDRQAIFPDTWTLTEEHGLQQERPRPEPGRLGSSSPASVTTEQLGAKM TERGSVARPTQGPETPRSPEGTTEAATQDGKEQPELPCAMAMGTPSTTERISTSGQAG TSSHGCWAWPLAGLSVGRSSLTACSLPLCACLLGQKMLRHCGRT" BASE COUNT 499 a 593 c 556 g 432 t ORIGIN 1 cccctctgca tttctctctt ctccagacca gctcctccac tgtggctctg agtgccccgg 61 ggctgtccag ctctgctccg tcctcatact gctcccttcc tccttctcct cctcccatgc 121 catctgtatt tctgccaccc accactatac cctcccctcg aggccagggc cacactccgg 181 agttcccttg tactgagcag agtggacgag gccttctacc tcctgtagcc cccagctggc 241 ttgatttggc tggtcttggg gtgatgcctg acaccttcaa ctcaaggtct ccctctgtgg 301 agggttctct gtgggcagtg ggcacagaga gtcagggtcg agattggagg cacctgccga 361 ccatcacaag tgagctctct ggggctcccc gctgccacac tgtaccctgt gctgggagca 421 cagctctcca agagcctggg gagccccagg ggccaccagc cagcccttcg tgcccagagg 481 aggccttggc tgccacatgg gagcagccat gggcttcgga ggtattcggg cctgagagaa 541 tgcccccctc tggagctgct cgaagcttcc aagaagtaac agagccagct gtagtggcag 601 tggaccggca ggccatcttc ccagatacct ggactctcac ggaggaacat ggcctacagc 661 aggagaggcc aaggccagag ccagggaggc tgggaagcag ctcccctgcc tcagttacca 721 cggagcagct aggtgcaaag atgaccgaga ggggaagtgt ggccaggcca acccagggac 781 ctgaaacccc aaggagccca gagggcacca cggaagctgc cacccaggac gggaaggaac 841 agccagagct tccatgtgcc atggccatgg gcacacccag caccacggag aggatttcca 901 cctctggcca ggcaggcacc agctcgcatg gctgctgggc atggccattg gcgggtctga 961 gtgtgggccg ctcctcgcta actgcatgca gcctcccact ctgcgcatgt ctgcttgggc 1021 agaaaatgct gagacactgt ggccggacct gacagtcagc acttggcagt gggctctgtg 1081 gacccagcat ttctcatagc gtcaacccac ctcttgcctt gttgaggctt tttcctttca 1141 gatgagctgt ccttgacatt ctgatgtggt gaaatggtta gcagcatgga ctttggaacc 1201 agatagacct agatacaaac cacatgtcta acacttgcta cctctgtgac cttgggcaac 1261 cccctccctc agcctcagtt ttctcatctg taaagtgggg agaatttcca tcaagattgt 1321 ccggagacct aaatgagata attcctggaa agtgtttaga acacagcatg tggtccctca 1381 ataggccgtg gctgacagta cttttattac ttgctttttg cttaaattaa aactttatgc 1441 cgggccaggt gtggtggctc acgcctgtaa tcccagcact ttgggaggcc gaggcgggcg 1501 gatcacctga ggttgggagt tcgaggccag cctgaccaac atggagaaac cccatctcta 1561 ctaaagatac aaaaagatta gctgggcatg gtggcgcatg cctgtaatcc cagctactca 1621 ggaggctgag gcaggagaat cacttgaacc caggacgcag aggttgcggt gagccaagat 1681 cataccattg cactccagcc tgggcaacaa gagtgaaact tggtctcaaa aaacaaaaac 1741 aaaacaacaa caacaacaaa aaactttatg cctcaccctg gcacagtagc ttatacctgt 1801 aatcctagca ctttgggagg ctgaggcaag aggatcgctt gagcccagga gtttgagacc 1861 agcctaggca acacagtgaa accctgtctc tacaaaaaat taaagattag ctgggcgtgg 1921 ttgcacatgc ctatagtccc agctgctggg gaggctaaag caggaggatg gctttagccc 1981 aggagtttga ggctgcagtg agttgtgatc gcaccactgc attcagcctg agcaacagat 2041 caagacactg tctcaaaaaa aaaaaaaaaa aaaaaaaaaa //