LOCUS BC052585 2242 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens podocalyxin-like 2, mRNA (cDNA clone MGC:59786 IMAGE:6264322), complete cds. ACCESSION BC052585 VERSION BC052585.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2242) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2242) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: h Column: 7. FEATURES Location/Qualifiers source 1..2242 /db_xref="H-InvDB:HIT000053802" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59786 IMAGE:6264322" /tissue_type="Skin, melanoma, melanotic" /clone_lib="NIH_MGC_112" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2242 /gene="PODXL2" /gene_synonym="PODLX2" /db_xref="GeneID:50512" /db_xref="HGNC:HGNC:17936" CDS 17..1834 /gene="PODXL2" /gene_synonym="PODLX2" /codon_start=1 /product="podocalyxin-like 2" /protein_id="AAH52585.1" /db_xref="GeneID:50512" /db_xref="HGNC:HGNC:17936" /translation="MGRLLRAARLPPLLSPLLLLLVGGAFLGACVAGSDEPGPEGLTS TSLLDLLLPTGLEPLDSEEPSETMGLGAGLGAPGSGFPSEENEESRILQPPQYFWEEE EELNDSSLDLGPTADYVFPDLTEKAGSIEDTSQAQELPNLPSPLPKMNLVEPPWHMPP REEEEEEEEEEEREKEEVEKQEEEEEEELLPVNGSQEEAKPQVRDFSLTSSSQTPGAT KSRHEDSGDQASSGVEVESSMGPSLLLPSVTPTTVTPGDQDSTSQEAEATVLPAAGLG VEFEAPQEASEEATAGAAGLSGQHEEVPALPSFPQTTAPSGAEHPDEDPLGSRTSASS PLAPGDMELTPSSATLGQEDLNQQLLEGQAAEAQSRIPWDSTQVICKDWSNLAGKNYI ILNMTENIDCEVFRQHRGPQLLALVEEVLPRHGSGHHGAWHISLSKPSEKEQHLLMTL VGEQGVVPTQDVLSMLGDIRRSLEEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVI GAICIIIIALGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQE KHPSLNGGGALNGPGSWGALMGGKRDPEDSDVFEEDTHL" BASE COUNT 521 a 691 c 691 g 339 t ORIGIN 1 cggcgacggc tacaccatgg gccggctgct gcgggccgcc cggctgccgc cgctgctttc 61 gccgctgctg cttctgctgg ttgggggagc gttcctgggt gcctgtgtgg ctgggtctga 121 tgagcctggc ccagagggcc tcacctccac ctccctgcta gacctcctgc tgcccactgg 181 cttggagcca ctggactcag aggagcctag tgagaccatg ggcctgggag ctgggctggg 241 agcccctggc tcaggcttcc ccagcgaaga gaatgaagag tctcggattc tgcagccacc 301 acagtacttc tgggaagagg aggaagagct gaatgactca agtctggacc tgggacccac 361 tgcagattat gtttttcctg acttaactga gaaggcaggt tccattgaag acactagcca 421 ggctcaagag ctgccaaacc tcccctctcc cttgcccaag atgaatctgg ttgagcctcc 481 ctggcatatg cctcccagag aggaggaaga agaggaagag gaagaggagg agagggagaa 541 ggaagaggta gagaaacaag aggaggagga agaggaggag ctgctccctg tgaatggatc 601 ccaagaagaa gccaagcctc aggtccgtga cttttctctc accagcagca gccagacccc 661 aggggccacc aaaagcaggc atgaagactc cggggaccag gcctcatcag gtgtggaggt 721 ggagagcagc atggggccca gcttgctgct gccttcagtc accccaacta cagtgactcc 781 gggggaccag gactccacca gccaagaggc agaggccaca gtgctgccag ctgcagggct 841 tggggtagag ttcgaggctc ctcaggaagc aagcgaggaa gccactgcag gagcagctgg 901 tttgtctggc cagcacgagg aggtgccggc cttgccttca ttccctcaaa ccacagctcc 961 cagtggggcc gagcacccag atgaagatcc ccttggctct agaacctcag cctcttcccc 1021 actggcccct ggagacatgg aactgacacc ttcctctgct accttgggac aagaagatct 1081 caaccagcag ctcctagaag ggcaggcagc tgaagctcaa tccaggatac cctgggattc 1141 tacgcaggtg atctgcaagg actggagcaa tctggctggg aaaaactaca tcattctgaa 1201 catgacagag aacatagact gtgaggtgtt ccggcagcac cgggggccac agctcctggc 1261 cctggtggaa gaggtgctgc cccgccatgg cagtggccac catggggcct ggcacatctc 1321 tctgagcaag cccagcgaga aggagcagca ccttctcatg acactggtgg gcgagcaggg 1381 ggtggtgccc actcaagatg tcctttccat gctgggtgac atccgcagga gcctggagga 1441 gattggcatc cagaactatt ccacaaccag cagctgccag gcgcgggcca gccaggtgcg 1501 cagcgactac ggcacgctct tcgtggtgct ggtggtcatt ggggccatct gcatcatcat 1561 cattgcgctt ggcctgctct acaactgctg gcagcgccgg ctgcccaagc tcaagcacgt 1621 gtcgcacggc gaggagctgc gcttcgtgga gaacggctgc cacgacaacc ccacgctgga 1681 cgtggccagc gacagccagt cggagatgca ggagaagcac cccagcctga acggcggcgg 1741 ggccctcaac ggcccgggga gctggggggc gctcatgggg ggcaagcggg accccgagga 1801 ctcggacgtg ttcgaggagg acacgcacct gtgagcgcag ccgaggcgca ggccgagtgg 1861 gccgccagga ccaagcgagg tggaccccga aacggacggc ccggagcccg caccagcccc 1921 gcgcctaccc gggccgcccc cgcggcctgg ccctcggcgc gggctccttc ccgcttcccc 1981 cgacttcaca cggcggcttc ggaccaactc cctcactccc gcccgagggg caggcctcaa 2041 agcccgcctt ggccccgctt tcccgcccct gaaccccggc cccgcgggcg gcgggcggcg 2101 cttcctgcgc cccgggactc aattaaaccc gcccggagac cacgccgggc ccagcgcgtc 2161 tgcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2221 aaaaaaaaaa aaaaaaaaaa aa //