LOCUS BC052577 4426 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone MGC:59915 IMAGE:4130626), complete cds. ACCESSION BC052577 VERSION BC052577.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4426) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4426) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30089915. FEATURES Location/Qualifiers source 1..4426 /db_xref="H-InvDB:HIT000053798" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59915 IMAGE:4130626" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..4426 /gene="PACS1" /gene_synonym="FLJ10209" /gene_synonym="KIAA1175" /db_xref="GeneID:55690" /db_xref="HGNC:HGNC:30032" /db_xref="MIM:607492" CDS 34..2925 /gene="PACS1" /gene_synonym="FLJ10209" /gene_synonym="KIAA1175" /codon_start=1 /product="phosphofurin acidic cluster sorting protein 1" /protein_id="AAH52577.1" /db_xref="GeneID:55690" /db_xref="HGNC:HGNC:30032" /db_xref="MIM:607492" /translation="MAERGGAGGGPGGAGGGSGQRGSGVAQSPQQPPPQQQQQQPPQQ PTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQMN LYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIV LPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINM AEVMQHPNEGALVLGLHSNVKDVSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDN YSEEEEESFSSEQEGSDDPLHGQDLFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKF VALLKRFKVSDEVGFGLEHVSREQIREVEEDLDELYDSLEMYNPSDSGPEMEETESIL STPKPKLKPFFEGMSQSSSQTEIGSLNSKGSLGKDTTSPMELAALEKIKSTWIKNQDD SLTETDTLEITDQDMFGDASTSLVVPEKVKTPMKSSKTDLQGSASPSKVEGVHTPRQK RSTPLKERQLSKPLSERTNSSDSERSPDLGHSTQIPRKVVYDQLNQILVSDAALPENV ILVNTTDWQGQYVAELLQDQRKPVVCTCSTVEVQAVLSALLTRIQRYCNCNSSMPRPV KVAAVGGQSYLSSILRFFVKSLANKTSDWLGYMRFLIIPLGSHPVAKYLGSVDSKYSS SFLDSGWRDLFSRSEPPVSEQLDVAGRVMQYVNGAATTHQLPVAEAMLTCRHKFPDED SYQKFIPFIGVVKVGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPS SPSMSSALAIVGSPNSPYGDVIGLQVDYWLGHPGERRREGDKRDASSKNTLKSVFRSV QVSRLPHSGEAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEVDSKSQVIEGISRLI CSAKQQQTMLRVSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT" BASE COUNT 952 a 1434 c 1138 g 902 t ORIGIN 1 cctcggcctc cgtaaccccc gcctagccgg gccatggcgg aacgcggagg ggcgggcggt 61 ggtcccggag gcgccggggg cggcagcggc cagcggggat ccggggtcgc ccagtcccct 121 cagcagccgc cgccgcagca gcagcagcag cagccgccgc agcagccgac gccccccaag 181 ctggcccagg ccacctcgtc gtcctcgtcc acctcggcgg cggctgcctc ctcctcgtcc 241 tcgtctacct ccacctccat ggccgtggcg gtggcctcgg gctccgcgcc tcccggtggc 301 ccggggccag gccgcacccc cgccccggtg cagatgaacc tgtacgccac ctgggaggtg 361 gaccggagct cgtccagctg cgtgcctagg ctattcagct tgaccctgaa gaaactcgtc 421 atgctaaaag aaatggacaa agatcttaac tcagtggtca tcgctgtgaa gctgcagggt 481 tcaaaaagaa ttcttcgctc caacgagatc gtccttccag ctagtggact ggtggaaaca 541 gagctccaat taaccttctc ccttcagtac cctcatttcc ttaagcgaga tgccaacaag 601 ctgcagatca tgctgcaaag gagaaaacgt tacaagaatc ggaccatctt gggctataag 661 accttggccg tgggactcat caacatggca gaggtgatgc agcatcctaa tgaaggcgca 721 ctggtgcttg gcctacacag caacgtgaag gatgtctctg tgcctgtggc agaaataaag 781 atctactccc tgtccagcca acccattgac catgaaggaa tcaaatccaa gctttctgat 841 cgttctcctg atattgacaa ttattctgag gaagaggaag agagtttctc atcagaacag 901 gaaggcagtg atgatccatt gcatgggcag gacttgttct acgaagacga agatctccgg 961 aaagtgaaga agacccggag gaaactaacc tcaacctctg ccatcacaag gcaacctaac 1021 atcaaacaga agtttgtggc cctcctgaag cggtttaaag tttcagatga ggtgggcttt 1081 gggctggagc atgtgtcccg cgagcagatc cgggaagtgg aagaggactt ggatgaattg 1141 tatgacagtc tggagatgta caaccccagc gacagtggcc ctgagatgga ggagacagaa 1201 agcatcctca gcacgccaaa gcccaagctc aagcctttct ttgaggggat gtcgcagtcc 1261 agctcccaga cggagattgg cagcctcaac agcaaaggca gcctcggaaa agacaccacc 1321 agccctatgg aattggctgc tctagaaaaa attaaatcta cttggattaa aaaccaagat 1381 gacagcttga ctgaaacaga cactctggaa atcactgacc aggacatgtt tggagatgcc 1441 agcacgagtc tggttgtgcc ggagaaagtc aaaactccca tgaagtccag taaaacggat 1501 ctccagggct ctgcctcccc cagcaaagtg gagggggtgc acacaccccg gcagaagagg 1561 agcacgcccc tgaaggagcg gcagctctcc aagcccctaa gtgagaggac caacagttcc 1621 gacagcgagc gctccccaga tctgggccac agcacgcaga ttccaagaaa ggtggtgtat 1681 gaccagctca atcagatcct ggtgtcagat gcagccctcc cagaaaatgt cattctggtg 1741 aacaccactg actggcaggg ccagtatgtg gctgagctgc tccaggacca gcggaagcct 1801 gtggtgtgca cctgctccac cgtggaggtc caggccgtgc tgtccgccct gctcacccgg 1861 atccagcgct actgcaactg caactcttcc atgccgaggc cagtgaaggt ggctgctgtg 1921 ggaggccaga gctacctgag ctccatcctc aggttctttg tcaagtccct ggccaacaag 1981 acctccgact ggcttggcta catgcgcttc ctcatcatcc ccctcggttc tcaccctgtg 2041 gccaaatact tggggtcagt cgacagtaaa tacagtagtt ccttcctgga ttctggttgg 2101 agagatctgt tcagtcgctc ggagccacca gtgtcagagc aactggacgt ggcagggcgg 2161 gtgatgcagt acgtcaacgg ggcagccacg acacaccagc ttcccgtggc cgaagccatg 2221 ctgacttgcc ggcataagtt ccctgatgaa gactcctatc agaagtttat tcccttcatt 2281 ggcgtggtga aggtgggtct ggttgaagac tctccctcca cagcaggcga tggggacgat 2341 tctcctgtgg tcagccttac tgtgccctcc acatcaccac cctccagctc gggcctgagc 2401 cgagacgcca cggccacccc tccctcctcc ccatctatga gcagcgccct ggccatcgtg 2461 gggagcccta atagcccata tggggacgtg attggcctcc aggtggacta ctggctgggc 2521 caccccgggg agcggaggag ggaaggcgac aagagggacg ccagctcgaa gaacaccctc 2581 aagagtgtct tccgctcagt gcaggtgtcc cgcctgcccc atagtgggga ggcccagctt 2641 tctggcacca tggccatgac tgtggtcacc aaagaaaaga acaagaaagt tcccaccatc 2701 ttcctgagca agaaaccccg agaaaaggag gtggattcta agagccaggt cattgaaggc 2761 atcagccgcc tcatctgctc agccaagcag cagcagacta tgctgagagt gtccatcgat 2821 ggggtcgagt ggagtgacat caagttcttc cagctggcag cccagtggcc cacccatgtc 2881 aagcactttc cagtgggact cttcagtggc agcaaggcca cctgaggccc tgtctcccag 2941 ccactttccc tcctggcact gccaccagcc tcaccgcctg cgggcagggg gaggccagca 3001 ggcccgggcc cagcacccct tccctggcac cagggtctgc ctctcactcg cccaggtccc 3061 gaaggacact gccacaggga cgccttccct cccctcccct ccagcccacc cctgcacagc 3121 ccctcctcct tcccgctttt ccccttctcc ctcctgctcc aggcccaagg cgtgttggtt 3181 ttgccttctg gtgcccatag tcccctggac tgagtccccc aggccttcct tcacccgact 3241 tccaaactct tccttgtggt atcagtttcc ttctcggaaa tgagaaagct ggaatcctgg 3301 tccccagcag gagagcctag tcctccccca gcccctccag ccaccagggt gtcctctagg 3361 atgcagctgc cagatccact cactctgctg cctccagcag gacccaaggc cactttcaac 3421 tcttatgggg ttctccacct gccccagagc ttctcaaggg agggtaaggg ggcaccctga 3481 gcccacagga cccctacttc acagctcaca ggggcaggag gcagctcccc tgcctccagg 3541 accctgttgc tatggtgaca cagcgtttct aggacagagg ggcctcccag tctcccccca 3601 ccacccgtgc acgacttcct caccaccccc aggttccctg cagatgtcgt gtgtgtcctg 3661 agtgtttctt tggttctttg cacgccaagt ctcttggttg taccatgtga cacaccctgt 3721 gcactggtcg ctgtcttcgt ggcttccacc cttgttaatg atgctcctgc ctctgcctcc 3781 cagcccctca cccagcacag ctctgcctgg acttggagag atgggaggca gacccccacc 3841 accatacatg ctgtctgtgg cccctcagac attctgtttc atctcccatt catctccctc 3901 ctcccaccgt gtcagttttt ctgcctttcc ctgctctgtt cttccccctc cttaggcccc 3961 agcctgggcc cagacccatc ctcccagcca ggtttccctc cagcaggctc cttccctccc 4021 tgtcacctcc ctctcaccaa cccggggtct gagcccctca ttcctgaccg tccgtgttct 4081 caggagtggt tgaggacaca gggccccagc ccagccctct gcacccccca gcccggccat 4141 ctgcgcccca cagccccttt ggagcttttc tcttgtcctc tcactccttc ccagaagttt 4201 ttgcacagaa cttcattttg aaagtgtttt tctcattctc catacctccc ccaagctctc 4261 ctccagccct tcccagggct cagccctgct gtcctgagcg tctcctgggc cagagagagg 4321 agatgggggt gggagggact gagttgatgt tgggtttttc attcaataaa ttggtgattt 4381 cttaccgaca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //