LOCUS BC052576 3367 bp mRNA linear HUM 17-JUN-2003
DEFINITION Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1, mRNA (cDNA clone
IMAGE:6644683), partial cds.
ACCESSION BC052576
VERSION BC052576.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3367)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3367)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16554586.
FEATURES Location/Qualifiers
source 1..3367
/db_xref="H-InvDB:HIT000099528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6644683"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3367
/gene="CTDP1"
/gene_synonym="FCP1"
/db_xref="GeneID:9150"
/db_xref="MIM:604927"
CDS <1..2625
/gene="CTDP1"
/gene_synonym="FCP1"
/codon_start=1
/product="CTDP1 protein"
/protein_id="AAH52576.1"
/db_xref="GeneID:9150"
/db_xref="MIM:604927"
/translation="AGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDL
TQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDL
DQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTF
GSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPISKTGNLRNLFPCGDSMVCIIDDRE
DVWKFAPNLITVKKYVYFQGTGDMNAPPGSRESQTRKKVNHSRGTEVSEPSPPVRDPE
GVTQAPGVEPSNGLEKPARELNGSEAATPRDSPRPGKPDERDIWPPAQAPTSSQELAG
APEPQGSCAQGGRVAPGQRPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESE
GKRGRQKPKAAPEGAGALAQGSSLEPGRPAAPSLPGEAEPGAHAPDKEPELGGQEEGE
RDGLCGLGNGCADRKEAETESQNSELSGVTAGESLDQSMEEEEEEDTDEDDHLIYLEE
ILVRVHTDYYAKYDRYLNKEIEEAPDIRKIVPELKSKVLADVAIIFSGLHPTNFPIEK
TREHYHATALGAKILTRLVLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWL
WSCLERWDKVEEQLFPLRDDHTKAQRENSPAAFPDREGVPPTALFHPMPVLPKAQPGP
EVRIYDSNTGKLIRTGARGPPAPSSSLPIRQEPSSFRAVPPPQPQMFGEELPDAQDGE
QPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKRRPEEQEEE
PQPRKPGTRRERTLGAPASSERSAAGGRGPRGHKRKLNEEDAASESSRESSNEDEGSS
SEADEMAKALEAELNDLM"
BASE COUNT 765 a 968 c 1074 g 560 t
ORIGIN
1 gcgggcgtgg tgcgggagct gtgcgcgcag ccgggccagg tggtcgcccc aggagcggtt
61 ctggtgaggt tggaaggatg cagccacccg gttgtcatga aaggcctgtg tgctgaatgt
121 ggccaagacc tcacccagtt gcagagtaag aacgggaagc agcaggtgcc gctgtccacg
181 gcgaccgtgt ccatggtgca cagcgtgccg gagttgatgg tgagctccga gcaagctgaa
241 cagctgggaa gagaagacca gcagcgactg caccgaaacc ggaagctggt gctcatggtg
301 gacttggacc agacgttgat tcacacaacc gagcagcact gtcagcagat gtcgaataaa
361 ggcatctttc acttccagct gggccggggt gagcccatgc tgcacacgcg cctgcgtcca
421 cactgcaagg acttcctgga gaagatcgcc aagctgtacg agctgcacgt cttcaccttc
481 ggcagccggc tgtacgcaca caccatcgca ggctttttag accccgagaa gaagcttttt
541 tctcaccgaa tattatcaag ggatgaatgt attgacccaa tttctaaaac gggaaacctt
601 agaaatctct ttccttgtgg agactcaatg gtttgcatta ttgatgatcg agaagatgtc
661 tggaagtttg cccccaatct gataactgtg aagaaatatg tatacttcca gggcacgggt
721 gatatgaatg cgccccctgg gtcccgagaa tctcagacga gaaagaaagt aaatcattct
781 cgaggcactg aggtctcaga gccatctccg cccgtgagag accctgaggg ggtaacgcag
841 gcccctggag tggagcccag caatggcctg gagaagcctg cacgggagct gaacggcagc
901 gaggccgcca ccccgcggga ctcaccccgc cccgggaagc cagacgagag ggacatctgg
961 ccccctgccc aggcccccac cagcagccaa gagctggcag gcgctcctga gccccaggga
1021 tcctgtgcgc agggtggccg ggtggcaccg ggacagcggc ctgcccaggg tgccacgggc
1081 actgacctgg actttgactt atccagcgac agcgagagca gcagtgagtc cgagggcacg
1141 aagtcctcct cctccgcctc tgatggcgaa agcgagggga aaagaggccg gcagaagccg
1201 aaggctgccc cagagggagc cggggcgctg gcacagggca gttccctgga gccggggcgg
1261 cctgcagcac cgagtctccc cggagaggcc gagcctggcg cgcatgcccc ggacaaggag
1321 cctgagctgg gtgggcagga ggagggcgag cgggatggcc tctgcggcct gggcaacggc
1381 tgtgccgaca ggaaggaggc ggagaccgag tcacagaaca gcgagctgtc gggggtcact
1441 gcgggtgagt ccctggacca gagcatggag gaggaggagg aggaggacac ggatgaggat
1501 gaccacctca tctacctgga ggagatcctg gtccgtgtac acactgacta ctatgccaag
1561 tatgaccgct acctcaacaa ggagatcgag gaggcgccgg acatccgcaa gatcgtgccg
1621 gagctcaaga gcaaggtgct ggcagacgtg gccataattt tcagtgggct acacccgaca
1681 aacttcccga tagagaagac gcgggagcat taccacgcca cggcgctggg agcgaagatc
1741 ctcactcggc tggtgctgag ccccgacgcc cctgacaggg ccacgcacct gatcgccgcg
1801 cgagctggca cagagaaggt gctgcaggca caggagtgcg gacacctgca cgtggtcaac
1861 cctgactggc tgtggagctg cctggagcgc tgggacaagg tggaggagca gctcttcccg
1921 ctcagggacg atcacaccaa ggcacagagg gagaacagcc ctgcggcctt tcccgaccgg
1981 gagggtgtgc cccccaccgc cttgttccac ccgatgccgg ttcttcccaa ggcccagcct
2041 ggccccgagg ttcggatcta cgactccaac acggggaagc tcatcaggac gggcgcccgg
2101 gggcccccag caccctccag ctccctaccc atccgccagg agccctcttc cttcagagcg
2161 gttccgccac cccagccgca gatgtttggt gaagagctgc ctgacgctca ggacggagag
2221 cagcctggcc cttctagaag aaagcgacag cccagtatgt ctgagacaat gccgctgtac
2281 actctttgta aggaggattt agagagtatg gacaaagagg tggacgacat ccttggagaa
2341 ggcagcgacg acagcgacag cgagaagagg aggcctgagg agcaggagga ggagccccag
2401 ccccggaagc cagggacccg cagggagcgg acgctcgggg cacctgcgtc cagcgagagg
2461 agcgcggcag ggggccgggg gcccagaggc cacaagagga agctgaatga agaggacgcc
2521 gccagcgagt ccagcaggga gtccagcaac gaggacgagg gcagcagctc cgaggccgac
2581 gagatggcca aggcgctgga ggcggagctc aacgacctca tgtgagcgcg ggcagcgggc
2641 agggactgaa gcctgaccga cctccagcag cactcggacg tccccggacc agccctcagt
2701 ctcggtccac gctgctttct tcccaaagga catgtatatt tgcagagctc cacatacaga
2761 aacacattat tttgcagaaa taggtgtttt taagaagttt tactacagga atgtctactt
2821 ttgtaagtga caggtgttaa aggcccaggt gtgctgtgcc aaagagctca gcagaggctc
2881 acgtggccca ggctggtgcg cccgctgtct cggtaagggg cgggttggtg tgttttcccc
2941 ttgtgtacca gagcacattc cttaggggac ggctttgggg gtcccacgag acatggacta
3001 ggagtttaag caggacagtg tgcgtgcacg agctccgagc ccagcacaga catgcctgga
3061 acccccgccg cctgctgctc cctcctaggg aacccatttc cggggaacgc cgtgactgtc
3121 gggcagcctg gagcttcctg cagcctccta cgcagggtcc acgccacgtg gcctgggctg
3181 ccatcctgcc gtcctcccac tggcatcctg gcaagggggc gttgcttttc ctgggcggcc
3241 ttttatgtct tggagacacc tgatgtaaag tttctgtaaa tctatttcat atctgaccca
3301 ccaaacagat ttctctttaa taaaaatcct ttttgtaagt tcaaaaaaaa aaaaaaaaaa
3361 aaaaaaa
//