LOCUS BC052568 4354 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens congenital dyserythropoietic anemia, type I, mRNA
(cDNA clone IMAGE:6645406), partial cds.
ACCESSION BC052568
VERSION BC052568.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4354)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4354)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..4354
/db_xref="H-InvDB:HIT000099525"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6645406"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4354
/gene="CDAN1"
/gene_synonym="CDA-I"
/gene_synonym="CDA1"
/gene_synonym="CDAI"
/gene_synonym="codanin"
/db_xref="GeneID:146059"
/db_xref="MIM:607465"
CDS <1..3689
/gene="CDAN1"
/gene_synonym="CDA-I"
/gene_synonym="CDA1"
/gene_synonym="CDAI"
/gene_synonym="codanin"
/codon_start=3
/product="CDAN1 protein"
/protein_id="AAH52568.1"
/db_xref="GeneID:146059"
/db_xref="MIM:607465"
/translation="GMAAVLESLLREEVSVAAVVRWIARSTQGSEDNAGEAAALSSLR
ALRKEFVPFLLNFLREQSSRVLPQGPPTPAKTPGASAALPGRPGGPPRGSRGARSQLF
PPTEAQSTAAEAPLARRGGRRRGPGPARERGGRGLEEGVSGESLPGAGGRRLRGSGSP
SRPSLTLSDPPNLSNLEEFPPVGSVPPGPTGTKPSRRINPTPVSEERSLSKPKTCFTS
PPISCVPSSQPSALDTSPWGLGLPPGCRSLQEEREMLRKERSKQLQQSPTPTCPTPEL
GSPLPSRTGSLTDEPADPARVSSRQRLELVALVYSSCIAENLVPNLFLELFFVFQLLT
ARRMVTAKDSDPELSPAVLDSLESPLFQSIHDCVFFAVQVLECHFQVLSNLDKGTLKL
LAENERLLCFSPALQGRLRAAYEGSVAKVFLVMPPSTQAVSFQPETDNRANFSSDRAF
HTFKKQRDVFYEVLREWEDHHEEPGWDFEKGLGSRIRAMMGQLSAACSHSHFVRLFQK
QLLQMCQSPGGAGGTVLGEAPDVLSMLGADKLGRLWRLQERLMAPQSSGGPCPPPTFP
GCQGFFRDFILSASSFQFNQHLMDSLSLKIQELNGLALPQHEPNDEDGESDVDWQGER
KQFAVVLLSLRLLAKFLGFVAFLPYRGPEPPPTGELQDSILALRSQVPPVLDVRTLLQ
RGLQARRAVLTVPWLVEFLSFADHVVPLLEYYRDIFTLLLRLHRSLVLSQESEGKMCF
LNKLLLLAVLGWLFQIPTVPEDLFFLEEGPSYAFEVDTVAPEHGLDNAPVVDQQLLYT
CCPYIGELRKLLASWVSGSSGRSGGFMRKITPTTTTSLGAQPSQTSQGLQAQLAQAFF
HNQPPSLRRTVEFVAERIGSNCVKHIKATLVADLVRQAESLLQEQLVTQGEEGGDPAQ
LLEILCSQLCPHGAQALALGREFCQRKSPGAVRALLPEETPAAVLSSAENIAVGLATE
KACAWLSANITALIRREVKAAVSRTLRAQGPEPAARGERRGCSRACEHHAPLPSHLIS
EIKDVLSLAVGPRDPDEGVSPEHLEQLLGQLGQTLRCRQFLCPPAEQHLAKCSVELAS
LLVADQIPILGPPAQYRLERGQARRLLHMLLSLWKEDFQGPVPLQLLLSPRNVGLLAD
TRPREWDLLLFLLRELVEKGLMGRMEIEACLGSLHQAQWPGDFAEELATLSNLFLAEP
HLPEPQLRACELVQPNRGTVLAQS"
BASE COUNT 890 a 1273 c 1297 g 894 t
ORIGIN
1 ccgggatggc ggccgttttg gagtcgctgc tgcgagaaga ggtgtcggtc gcagccgtcg
61 tgcggtggat cgcgcgcagc acccagggtt cggaggataa cgctggggag gcggccgcgc
121 tgagctcact ccgggccctg cggaaagaat tcgtaccgtt cctgttgaac ttcctgaggg
181 agcagagcag ccgcgtcctc ccgcaggggc ccccgacccc cgccaagacc ccgggcgcct
241 cggcagcctt gccagggagg ccgggaggcc cgccgcgggg tagccgcggg gcgcgcagcc
301 agcttttccc tccgaccgag gcccagagca ccgctgccga ggcccctctg gcccgccgcg
361 ggggcaggag gcggggcccg gggccggccc gcgagcgtgg aggccgcggc ctggaggagg
421 gggtcagcgg ggagagcctg cccggagccg ggggccggag gcttaggggc tctggcagcc
481 ccagccgccc cagcctcacg ctgtctgatc cgccaaacct cagcaacctg gaggagttcc
541 ctcccgtagg ctcggttccc cccggcccta cagggacgaa gccttctcgc aggatcaacc
601 caactccggt gagcgaagag cggtcactct ccaagcccaa gacctgcttc acctcacccc
661 caatcagctg tgtccccagt tcccaaccct cagccctgga cactagccct tggggccttg
721 gccttccccc agggtgcaga agtctgcaag aggagcgaga gatgctcagg aaggagcgct
781 ctaagcagct gcagcagtca cctaccccca cctgtcccac cccagaattg gggtcgcccc
841 tccccagccg gacaggaagc ctcacagatg aacctgcaga ccctgccaga gtgtcttccc
901 gccagcgcct ggagcttgta gcccttgttt actcctcgtg cattgctgag aacctggtac
961 caaacctctt cttggagctt ttcttcgtct ttcagctcct cactgcccgg aggatggtga
1021 ctgccaagga cagcgaccct gaactaagtc cagctgtcct agattccctg gaaagtccac
1081 tgttccaaag catccacgat tgtgtcttct ttgcagtgca ggttttggag tgtcactttc
1141 aggttctttc caacctggac aaagggacct tgaagctgct ggctgagaat gagcggctgc
1201 tgtgcttctc accagctctg caaggccgcc ttcgagctgc ctatgagggc agtgttgcca
1261 aggtctttct ggtgatgcct ccctctactc aagctgtctc ctttcagcca gagactgaca
1321 atcgtgccaa cttctccagt gaccgagcct ttcatacttt taagaaacag agggatgtgt
1381 tttatgaggt gctgcgagag tgggaagatc accatgagga gcctggctgg gattttgaga
1441 agggcttggg cagcagaatc agggccatga tgggtcagct ctccgcagcc tgcagccaca
1501 gccactttgt tcggcttttc caaaaacaac tactccagat gtgtcagagc cctggtggtg
1561 ctgggggcac cgtcttgggc gaggccccag atgtgttgag tatgctggga gctgacaagc
1621 tggggcggtt gtggcgccta caggaacggc ttatggctcc tcagagcagt ggggggccct
1681 gcccaccccc caccttccca ggctgtcaag gcttctttag ggacttcatc cttagtgcca
1741 gcagcttcca gtttaaccag catctcatgg acagtctgag cttgaagatc caggagctca
1801 atggtcttgc cctgccccag catgagccca atgatgaaga cggggagtca gacgtagact
1861 ggcagggtga gcggaagcaa tttgctgtgg tgcttcttag cctgagactt ttggctaaat
1921 tcctgggctt tgtggctttc ctgccatacc gggggcctga acctcccccg accggtgagc
1981 ttcaggactc cattctggcc ctcaggagcc aggtccctcc ggtcctggat gtgcggactc
2041 tgctgcagcg agggctgcag gcccgccggg cggtgctcac cgtgccctgg ctggtggagt
2101 ttctctcctt tgctgaccat gttgttccct tgctggaata ttaccgggac atcttcactc
2161 tcctgctgcg cctgcaccgg agcttggtgt tgtcgcagga gagtgagggg aagatgtgtt
2221 tcctgaacaa gctgctgcta cttgctgtcc tgggctggct tttccagatt cccacagtcc
2281 ctgaggactt gttctttctg gaagagggtc cctcatatgc ctttgaggtg gacacagtag
2341 ccccagagca tggcttggac aatgcgcctg tggtggacca gcagctgctc tacacctgct
2401 gcccctacat cggagagctc cggaaactgc tcgcttcgtg ggtgtcaggc agtagtggac
2461 ggagtggggg cttcatgagg aaaatcaccc ccaccactac caccagcctg ggagcccagc
2521 cttcccagac cagccagggg ctgcaggcac agctcgccca ggcctttttc cacaaccagc
2581 cgccctcctt gcgccggacc gtagagttcg tggcagaaag aattggatca aactgtgtca
2641 aacatatcaa ggctacactg gtggcagatc tggtgcgcca ggcagagtca cttctccaag
2701 agcagctggt gacacaggga gaggaagggg gagacccagc ccagctgttg gagatcttgt
2761 gttcccagct gtgccctcac ggggcccagg cattggccct ggggcgggag ttctgtcaaa
2821 ggaagagccc tggggctgtg cgggcgctgc ttccagagga gaccccggca gccgttctga
2881 gcagtgcaga gaacattgct gtggggcttg caacagagaa agcctgtgct tggctgtcag
2941 ccaacatcac agcactgatc aggagggagg tgaaagcagc agtgagtcgc acacttcgag
3001 cccagggtcc tgaacctgct gcccgggggg agcggagggg ctgctcccgc gcctgtgagc
3061 accatgctcc cctcccctcc cacctcatct ccgagataaa agacgtgctc tccttggccg
3121 tggggccacg ggaccctgac gagggagtct ccccagagca tctggaacag ctcctaggcc
3181 agctgggcca gacgctgcgg tgccgccagt tcctgtgccc acctgctgag cagcatctgg
3241 caaagtgctc tgtggagtta gcttccctcc tcgttgcaga tcaaattcct atcctagggc
3301 ccccggcaca gtacaggctg gagagagggc aggctcgaag gcttctgcac atgctgcttt
3361 ccttgtggaa ggaagacttt caggggccgg ttccgctgca gctgctgctg agcccaagaa
3421 atgtggggct tctggcagac acaaggccaa gggagtggga cttgctgcta ttcttgctac
3481 gggagctggt ggagaagggt ctgatgggac ggatggagat agaggcctgc ctgggcagcc
3541 tccaccaggc ccagtggcca ggggactttg ctgaagaatt agcaacactg tctaatctgt
3601 ttctagccga gccccacctg ccagaacccc agctaagagc ctgtgagttg gtgcagccaa
3661 accggggcac tgtgctggcc cagagctagg gctgagaagt ggccctgcct tgggcattgc
3721 accagaaccc tggacccccg cctcacgagg aggcccaagt gcccaatgca gaccctcact
3781 ggttggggtg tagctgggtc tacagtcaga cttcctgctc taagggtgtc actgcctggc
3841 atcccaccac gcgaatccta gaggaaggag agttggcctg atttgggatt atggcagaaa
3901 agtccagaga tgccagtcct ggagtagaag aggtggtgtt tgtttatctc ttggatacta
3961 aatgaaatga ggtgtgtggg cttgtcaaca cagaattcaa gcctcatttg ctatcccagc
4021 atctcttaaa actttgtagt cttggaattc atgacagagg caaatgactc ctgcttaact
4081 tatgaagaaa gttaaaacat gaatcttggg agtctacatt ttcttatcac caggagctgg
4141 actgccatct ccttataaat gcctaacaca ggccgggtct ggtggctcat gcctgtaatc
4201 ccagcacttt gagaggcctg aggtcggcgg actgcctgag gtcaggaatt caagaccagc
4261 ctggccaaca tggcaaaacc ccatctctac taaaaataaa aaaattatta gctggaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//