LOCUS BC052375 858 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 85, mRNA (cDNA clone
MGC:61599 IMAGE:6147448), complete cds.
ACCESSION BC052375
VERSION BC052375.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: l Column: 12.
FEATURES Location/Qualifiers
source 1..858
/db_xref="H-InvDB:HIT000053787"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61599 IMAGE:6147448"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..858
/gene="C9orf85"
/gene_synonym="MGC61599"
/gene_synonym="RP11-346E17.2"
/db_xref="GeneID:138241"
/db_xref="HGNC:HGNC:28784"
CDS 68..541
/gene="C9orf85"
/gene_synonym="MGC61599"
/gene_synonym="RP11-346E17.2"
/codon_start=1
/product="chromosome 9 open reading frame 85"
/protein_id="AAH52375.1"
/db_xref="GeneID:138241"
/db_xref="HGNC:HGNC:28784"
/translation="MSSQKGNVARSRPQKHQNTFSFKNDKFDKSVQTKKINAKLHDGV
CQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK
EDIVIPLNKETEKIEHTENNLSSNHRRSCRRNEESDDDLDFDIDLEDTGGDHQMN"
BASE COUNT 283 a 165 c 209 g 201 t
ORIGIN
1 gttcgttggt tttctttccc ctcatccttt tgcctgctcc cggcgagggg tggctttgat
61 ttcggcgatg agctcccaga aaggcaacgt ggctcgttcc agacctcaga agcaccagaa
121 tacgtttagc ttcaaaaatg acaagttcga taaaagtgtg cagaccaaga aaattaatgc
181 aaaacttcat gatggagtat gtcagcgctg taaagaagtt cttgagtggc gtgtaaaata
241 cagcaaatac aaaccattat caaaacctaa aaagtgtgtt aaatgtttac aaaagacagt
301 gaaggattct tatcacataa tgtgcaggcc atgtgcctgt gaacttgaag tttgcgcaaa
361 atgtggaaag aaagaagaca ttgttattcc gttgaataaa gaaacagaaa aaatagaaca
421 tactgaaaat aatctaagtt ccaaccatag aagaagctgc agaagaaatg aagaaagtga
481 tgatgattta gattttgata ttgatttaga agacacagga ggagaccatc aaatgaatta
541 atatcactgt attaaaagtc tgccgggcac agtggctcac gcctgtaatc ccaacacttt
601 gggaggccaa ggagggtgga tcacctgagg tcaggagttc gagaccagcc tggccaacat
661 ggcggaaccc catctccact aaaagtacaa aaaattagct gggcgtggtg gctcatgcct
721 gtaatcccag ctactcggga ggctgaggca ggaggattgc ttgaaccctg gaggcggaga
781 ttgaggtgag ctgagttcgt gccattacac tccagcctgg gtgacagagt gagactctgt
841 ctcaaaaaaa aaaaaaaa
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