LOCUS BC052306 1795 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SLC2A4 regulator, mRNA (cDNA clone MGC:59731
IMAGE:6576325), complete cds.
ACCESSION BC052306
VERSION BC052306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: n Column: 10.
FEATURES Location/Qualifiers
source 1..1795
/db_xref="H-InvDB:HIT000053779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59731 IMAGE:6576325"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1795
/gene="SLC2A4RG"
/gene_synonym="GEF"
/gene_synonym="HDBP1"
/gene_synonym="Si-1-2"
/gene_synonym="Si-1-2-19"
/db_xref="GeneID:56731"
/db_xref="HGNC:HGNC:15930"
/db_xref="MIM:609493"
CDS 101..1264
/gene="SLC2A4RG"
/gene_synonym="GEF"
/gene_synonym="HDBP1"
/gene_synonym="Si-1-2"
/gene_synonym="Si-1-2-19"
/codon_start=1
/product="SLC2A4 regulator"
/protein_id="AAH52306.1"
/db_xref="GeneID:56731"
/db_xref="HGNC:HGNC:15930"
/db_xref="MIM:609493"
/translation="MERPPPRAAGRDPSALRAEAPWLRAEGPGPRAAPVTVPTPPQGS
SVGGGFAGLEFARPQESEPRASDLGAPRTWTGAAAGPRTPSAHIPVPAQRATPGKARL
DEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSSSNSGDWGWD
LASDQSSPSTPSPPLPPEAAHFLFGEPTLRKRKSPAQVMFQCLWKSCGKVLSTASAMQ
RHIRLVHLGRQAEPEQSDGEEDFYYTELDVGVDTLTDGLSSLTPVSPTASMPPAFPRL
ELPELLEPPALPSPLRPPAPPLPPPPVLSTVANPQSCHSDRVYQGCLTPARLEPQPTE
VGACPPALSSRIGVTLRKPRGDAKKCRKVYGMERRDLWCTACRWKKACQRFLD"
BASE COUNT 293 a 640 c 583 g 279 t
ORIGIN
1 cagggcgggg gtcggcggcc cggccagccc ggcccggccc ggggccgcgt cctgagagtc
61 agccctcgcc gctgcagcct cggcgcccgg ccggccggcc atggagcgcc ccccgccccg
121 cgccgccggc cgggacccca gtgcgctgcg ggccgaggcg ccgtggctgc gcgcggaggg
181 tccggggccg cgcgccgcgc ccgtgacggt gcccacgccg ccgcagggct cttccgtggg
241 cggcggcttc gcgggcttgg agttcgcgcg gccgcaggag tcggagccgc gggcctcgga
301 cctgggggcc ccccggacgt ggacgggggc ggcggcgggg ccccggactc cgtcggcgca
361 catccccgtc ccagcgcaga gagccacccc aggaaaagcc cggctggacg aggtcatggc
421 tgccgctgcc cttacaagcc tgtccaccag ccctctcctt ctgggggccc cggttgcagc
481 cttcagccca gagcctggcc tggagccctg gaaggaggcc ctggtgcggc ccccaggcag
541 ctacagcagc agcagcaaca gtggagactg gggatgggac ctggccagtg accagtcctc
601 tccgtccacc ccgtcacccc cactgccccc cgaggcagcc cactttctgt ttggggagcc
661 caccctgaga aaaaggaaga gcccggccca ggtcatgttc cagtgtctgt ggaagagctg
721 cgggaaggtg ctgagcacgg cgtcggcgat gcagagacac atccgcctgg tgcacctggg
781 gaggcaggca gagcctgagc agagtgatgg tgaggaggac ttctactaca cagagctgga
841 tgttggtgtg gacacgctga ccgacgggct gtccagcctg actccagtgt cccccacggc
901 ctccatgccg cctgccttcc cccgcctgga gctgccagag ctgctggagc ccccagccct
961 gcctagtccc ctgcggccgc ctgccccgcc cctgcccccg ccccctgtcc tgagcaccgt
1021 tgctaacccc cagtcctgtc acagtgaccg tgtctaccag ggctgcctga cgcccgcccg
1081 cctggagccg cagcccacgg aggtcggagc ctgcccaccc gccttgtcct ccaggatcgg
1141 agtcaccctg aggaagcccc gcggcgacgc gaagaagtgc cggaaggtgt atggcatgga
1201 gcgccgggac ctctggtgca cagcctgccg ctggaagaaa gcctgccagc ggttcctgga
1261 ctaagtccgg ctcgttcaag aacataagct accaccttct ccctccccac cccctccagg
1321 cccggggctg aaacagcccg aggacagccc caggggctgg ctttcaccag ctgcagggtc
1381 tgcttttact tggtgtgggg gggcggggct gaccctgaac cctccccccc gccaggtcgg
1441 ggaggggtcc caccactcaa agtgcctcta aagaaaccag ctttttgcac taaagccaaa
1501 ccacaccgct gtccccttag ccccaagggc cctgggggca gccaccctcc cgcctgtcgg
1561 cccgtagatt tatcaagggt gttatgggcc cagctttggg gggccagtcc cgatgcactt
1621 tgaggggtgt tggagagggg actcccccac tcgcacttaa ctcaacggct ctcgggccct
1681 ggggctgttt ttaccatgtt tgtttttgaa gctcaggtgt ctcacgtctg ggctgcacca
1741 ggcgaagaga gaaattaaag atttgaggtt tttccagaaa aaaaaaaaaa aaaaa
//