LOCUS BC052304 2588 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transducin (beta)-like 1X-linked, mRNA (cDNA clone
MGC:59682 IMAGE:6378852), complete cds.
ACCESSION BC052304
VERSION BC052304.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2588)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2588)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913359.
FEATURES Location/Qualifiers
source 1..2588
/db_xref="H-InvDB:HIT000053778"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59682 IMAGE:6378852"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2588
/gene="TBL1X"
/gene_synonym="EBI"
/db_xref="GeneID:6907"
/db_xref="HGNC:HGNC:11585"
/db_xref="MIM:300196"
CDS 488..2221
/gene="TBL1X"
/gene_synonym="EBI"
/codon_start=1
/product="transducin (beta)-like 1X-linked"
/protein_id="AAH52304.1"
/db_xref="GeneID:6907"
/db_xref="HGNC:HGNC:11585"
/db_xref="MIM:300196"
/translation="MTELAGASSSCCHRPAGRGAMQSVLHHFQRLRGREGGSHFINTS
SPRGEAKMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALIS
ILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQAS
AAAAAAAATAAATAATTTSAGVSHQNPSKNREATVNGEENRAHSVNNHAKPMEIDGEV
EIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRH
CIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA
LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDM
CIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDL
QAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPV
YSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASAS
DGSVCVLDLRK"
BASE COUNT 644 a 705 c 735 g 504 t
ORIGIN
1 gcccccactc cgcgcttggg agcgaggagc cgccagcgcc cccgccccgc cgccgccgca
61 gcgccctcag gccgccattc gccaccgaaa ctttccagcg cccgcgctct ctccgggact
121 cggcggcggc ggggcggggg cggcccgggg gcggcgcgcg gctgctccgg ggcgccgggc
181 cctcttcggc cgccgcacgg ccgggactcg gaggctgccg gctggaggga ggttcggagc
241 gcggccgggc gcgcggcgcc gccacaagtt gcgctgctcg cgacgagatt tccgtgaggg
301 tggaagaaaa tcataccata tcagatgcct cgcagagcac caggcccacc gtgaaaggct
361 ggtccctgca gacggcttcc catttttatg accggatgct gggaagcctg ctggtccaca
421 ggtccataca tgaagtcacc ataaggagcc ctggcctcct tgcagaaaca tcgaggtgac
481 atgtagcatg accgagctcg ctggcgcctc ttcatcgtgc tgccaccgcc ctgcaggaag
541 aggggccatg cagtcagtct tgcaccactt tcaacgtttg cgagggagag agggtggttc
601 ccacttcatc aacacctcat cgccgcgagg tgaggctaag atgagcataa ccagtgacga
661 ggtgaacttt ctggtgtatc ggtatctcca ggagtcaggt ttttcccact cggctttcac
721 gtttgggatt gagagccaca tcagccagtc caacatcaat gggacgctag tgccaccggc
781 cgccctcatc tccattctcc agaagggcct gcagtatgta gaggccgaga tcagtatcaa
841 cgaggatggc acagtgttcg acggccgccc catagagtcc ctgtcactga tagacgccgt
901 gatgcccgac gtggtgcaga cgcggcagca ggcattccga gagaagctcg ctcagcagca
961 agccagtgcg gcggcggcgg cggctgcggc cacggcagca gcgacagcag ccaccacgac
1021 ctcagccggc gtttcccacc aaaatccatc gaagaacaga gaggccacgg tgaatgggga
1081 agagaacaga gcacattcag tcaataatca cgcgaagcca atggaaatag atggagaggt
1141 tgagattcca tccagcaaag ccacagtcct tcggggccat gagtctgagg tgttcatttg
1201 tgcctggaat cctgtcagtg atttgctagc ctccggatct ggagactcaa ctgcaaggat
1261 atggaacctg aatgagaata gcaacggggg ctccacccag ctcgtgttga ggcactgtat
1321 acgagagggg ggccatgacg tcccgagtaa caaagacgtc acctcactgg actggaatac
1381 caatggaaca ctcttggcta cgggttcata tgacggtttt gcaagaatat ggacggaaga
1441 tggtaacctg gccagcacct taggccaaca taaaggcccc atctttgcct tgaaatggaa
1501 ccgaaagggg aattacattt tgagtgctgg tgtagacaaa acaacaataa tttgggatgc
1561 ccacacagga gaagccaaac agcagtttcc ttttcattca gcccctgccc ttgatgtgga
1621 ctggcagaac aacacgacct ttgcctcctg tagcacagac atgtgtatcc atgtgtgcag
1681 gctcggctgt gaccgcccag tcaaaacctt ccagggacac acaaacgagg tcaacgccat
1741 caaatgggat ccgtctggaa tgttgctggc atcctgctcg gatgacatga cattgaagat
1801 ctggagcatg aaacaggagg tgtgcatcca tgatcttcag gctcacaata aagagatcta
1861 caccatcaag tggagcccca ctgggcccgc caccagcaac ccaaactcca acatcatgtt
1921 ggcaagtgct tcgtttgatt ctacggtgcg actgtgggac atagaacgag gcgtctgcac
1981 ccacacgctc acgaagcatc aggagcctgt ctatagcgta gctttcagcc ctgatgggaa
2041 gtacttggcc agtggatcct tcgacaagtg cgtccatatc tggaatactc agagtggaaa
2101 tcttgtccac agctaccgag gcactggcgg catcttcgag gtgtgctgga acgcccgagg
2161 agacaaagtg ggtgccagcg cgtccgacgg ctctgtgtgt gttttggatc tgcggaagta
2221 accacaaaat attatcgaaa aaagaaaaga attctaatga ccagccgtga atgtgtaggg
2281 ttgcagctct attctccaaa actgtaggaa cttgacttgc gttagagtgt actctgaaac
2341 caactcgtct ctggccgcag gagtctatat gttttcgtaa tcttcatcaa gaagttttta
2401 aaaggcaagc aaaaacagaa gcaaatcata tcaaacgggg atagaatggt ttccactgag
2461 gacattcagc ctgggaagga ggaagtcacc agctcgaggc gtgtggattg gtttccaccc
2521 ggaacaggct ctgtgatggc tgaatggaaa gaaacgtaaa aagctgtgcc aaaaaaaaaa
2581 aaaaaaaa
//