LOCUS BC052297 757 bp mRNA linear HUM 10-JUL-2008 DEFINITION Homo sapiens chromosome 9 open reading frame 169, mRNA (cDNA clone MGC:59937 IMAGE:6293780), complete cds. ACCESSION BC052297 VERSION BC052297.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 757) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 757) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: j Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39752686. FEATURES Location/Qualifiers source 1..757 /db_xref="H-InvDB:HIT000053773" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59937 IMAGE:6293780" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..757 /gene="C9orf169" /db_xref="GeneID:375791" /db_xref="HGNC:HGNC:30529" CDS 51..485 /gene="C9orf169" /codon_start=1 /product="chromosome 9 open reading frame 169" /protein_id="AAH52297.1" /db_xref="GeneID:375791" /db_xref="HGNC:HGNC:30529" /translation="MDPQEMVVKNPYAHISIPRAHLRPDLGQQLEVASTCSSSSEMQP LPVGPCAPEPTHLLQPTEVPGPKGAKGNQGAAPIQNQQAWQQPGNPYSSSQRQAGLTY AGPPPVGRGDDIAHHCCCCPCCHCCHCPPFCRCHSCCCCVIS" BASE COUNT 158 a 273 c 211 g 115 t ORIGIN 1 ctcagaagac cgagaggaca gactgccgtg ttgccaccac aggctggacc atggaccccc 61 aagagatggt cgtcaagaac ccatatgccc acatcagcat cccccgggct cacctgcggc 121 ctgacctggg gcagcagtta gaggtggctt ccacctgttc ctcatcctcg gagatgcagc 181 ccctgccagt ggggccctgt gccccagagc caacccacct cttgcagccg accgaggtcc 241 cagggcccaa gggcgccaag ggtaaccagg gggctgcccc catccagaac cagcaggcct 301 ggcagcagcc tggcaacccc tacagcagca gtcagcgcca ggccggactg acctacgctg 361 gccctccgcc cgtggggcgc ggggatgaca tcgcccacca ctgctgctgc tgcccctgct 421 gccactgctg ccactgcccc cccttctgcc gctgccacag ctgctgctgc tgtgtcatct 481 cctagcccag cccaccctgc cagggccagg acccagactt cagcaaatgt ggctcacaca 541 gtgccgggac atgccgggac atgcggggtg gctgttgtca tgggcgtctg ccccttcaca 601 ccaggcactg gggctcagac ccaccaggaa ggtggccgtt cagcccgagc tcctgaaacg 661 gaatcccagg tcctggctgg agagggacac ccctgattac cttaaggccc aggcaataaa 721 gcagggtgat cttcctccca aaaaaaaaaa aaaaaaa //