LOCUS BC052255 3207 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens myxovirus (influenza virus) resistance 1,
interferon-inducible protein p78 (mouse), mRNA (cDNA clone
IMAGE:6301184), with apparent retained intron.
ACCESSION BC052255
VERSION BC052255.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3207)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3207)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3207
/db_xref="H-InvDB:HIT000099482"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6301184"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 765 a 846 c 891 g 705 t
ORIGIN
1 gtcgcttctg ggggcagcgc ccagtaaccg cgctaggagc gcggagaagg gcattgggag
61 agcggcgttc gtggcggaga ctagcgctcc ggagcacggg cacgacgggg gcaccttctc
121 ggctgctagt aactaacaat aataataatc ataatcatag caagggcgct gatgggcggg
181 ctcggagcac gcctgattct ggttcccacc aggctgccca ggctcctgat gacgcatcag
241 aaacatcccc ctaacccgcg gccttcctgc aggagaggtt gggaaggggt gggggacggg
301 gctcggggga ggtctccgag ggactctagt aagcggggaa gggcgccggg aaagtttcag
361 atccacggct gcgcgggcca cgagcccacc cgaacgccga ccactgcttt ccgtcgactt
421 ctatttcctg ggaacgcgcg aaagcaaacc caagtcagac tgcggaggtc gctggggagg
481 gaaggttcaa ggagttctcg ccgatcctgc tgaataaagg gggttccgag ctgggccgag
541 atggggcatg cgcgggaaga cccctgcccg ctgttccccc cccaccgccc cagtggatgc
601 catgcctggg gcctccccgg cgcgtggggc tgacgcaccc tcggggtcca tcgtagttgg
661 ccgggatcgt ggagtgggtg cggtggacga agggaggcag gacagtcccg ggggtggcag
721 aaggagcccg ggcacagctg agacctgcgc tcccatccca ccaacactca cagcaggtgc
781 tgccgagctg ggcaattggg atggcccaag ttatttggtt aaattttaaa tcacgtttgt
841 tactgggaag tagagtccag tgatgctaac cgcgcctcta cctccaccac cggtgtcagt
901 cccaaagggc tcctaaaatg gctgtgtcat ctttcagcct tggaccgcag ttgccggcca
961 ggaatcccag tgtcacggtg gacacgcctc cctcgcgccc ttgccgccca cctgctcacc
1021 cagctcaggg gctttggaat tctgtggcca cactgcgagg agatcggttc tgggtcggag
1081 gctacaggaa gactcccact ccctgaaatc tggagtgaag aacgccgcca tccagccacc
1141 attccaaggt aaggcagaaa tgaagtgggc cgttgggttc tttcttttct ttctttcttt
1201 tttttgagac aaggtctcac tctgtcgccc aggctggagt gcagtggcgc catctcagct
1261 cactgcaacc cccgcctccc aggttcaagc gattctggtg cctcagtctc ctgagtagct
1321 gggattacag gcacacatca ccacacctgg ctaatttgta tgtgtttagt agagacagca
1381 tttcaccata ttggccaggc tggtttcaaa ctcctggcct caaatgatcc acccgccttg
1441 gcttcccaaa gtactgggat tacaggcacg agccactgca cccagtcagg ttcattttag
1501 ttgttatgtt aaccaggttt cctgcacctg tgcgctaact ttcactttcc caaaaggttt
1561 cagggtgacc cagcaggcaa tgagtgattc tcaaattcag gatttattgt gagagattca
1621 cacacacaat tgagcagaca ttcacagtac aatgattaaa gggagtgatt agggtaagga
1681 cccacagtgg aggctctgga ggccagccca ctgacagcca ctccagggag tccagaagtc
1741 ccgctctagt gctgggtggt ggagggaaat ctgttcctcc agggacctcg tcctcggctg
1801 cccagctgcc aaagtcagga agaagctttc agaaatctca ctgccaagat tccgaaaacg
1861 cttcagacat tgccagtccc ttgtcgcttt tgcgatcctc cacaggtgtg cgtgccactg
1921 ggtccttatt cactggggtc tctggtggca ttgggccaca gcaagtgttc cctcatcccc
1981 ttagtctacc acacacatgc ttaccacttt gaagaaaaac ccctttacta tgagcgaaag
2041 tgagaaacac gtatgtttat tgtttctaaa gaaagaaact taatatgggc ttaatgctac
2101 ctagtgagtg cctccatttt gagacattag ggtcacaagt cattattata tatcatgggc
2161 acaaacctgc cctgggcagg gacggaagga agcccctgca caggggcagt tgctcaggat
2221 gtgagaagag cctggtgcat aaccccatcc atgcccacct aacatctcag gctctgacca
2281 gtggggctgt gcagtagcga gtggatggag ggctggaacc ctgcagcctc ctctccaaac
2341 acagggtgca gccaagacat tttaggagca atttgggatg gagagctagg agtcgccacc
2401 tcttggctct tccaaggccg gaactggtgc ctgcactcag ttcagtttga agactgcagc
2461 tggatgccaa gttccatgga ggagtaagaa accggtttga actcccgaga ttgccctgcc
2521 cctgaaatcc aaactgatgt tccgaatgat cagggaaagg tacaaacgtt tatggtttac
2581 agacaaaacc cataaggttt agctttcaga gaatctcatt ttatgaagca aattagggaa
2641 gggaatctac tcaccaagtc ctgtttcagc tgattgagtg gaacctgtgg tcatgtggta
2701 caagtcctgg tctcaatgat gctccttatc tggctgcaga aaggccaact gaggcaacca
2761 tagcccagaa gactggtact cctgagaggc agatgaagtg gtggtctttg atatcgagcc
2821 tgggatgccc tgggcacatg aggtatttcc aaaggcatgg gagttttagg gaataaattc
2881 ccagattgtc agactccata agtaccgttt acaatggatt acgttttata accatcccaa
2941 tcctacctga caaaagaggt gggcggatta cgaggtcagg aaattgagac catcctggct
3001 aacactgtga gaccccatct ctactaaata aatacaaaaa attagccggg tctggtggcg
3061 tgcacctgta gtcccagcta cttgggagcc tgaggcagga taatcgcttg aacccgggag
3121 gtggaggttg cagtgagcca agattgcgcc actgctctcc agcctggtga caaagcgaga
3181 ctgtctcaaa aaaaaaaaaa aaaaaaa
//