LOCUS BC051907 2813 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fragile X mental retardation, autosomal homolog 2,
mRNA (cDNA clone MGC:60375 IMAGE:6149976), complete cds.
ACCESSION BC051907
VERSION BC051907.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2813)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2813)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6598321.
FEATURES Location/Qualifiers
source 1..2813
/db_xref="H-InvDB:HIT000053741"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60375 IMAGE:6149976"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2813
/gene="FXR2"
/db_xref="GeneID:9513"
/db_xref="HGNC:HGNC:4024"
/db_xref="MIM:605339"
CDS 197..2218
/gene="FXR2"
/codon_start=1
/product="fragile X mental retardation, autosomal homolog
2"
/protein_id="AAH51907.1"
/db_xref="GeneID:9513"
/db_xref="HGNC:HGNC:4024"
/db_xref="MIM:605339"
/translation="MGGLASGGDVEPGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFEN
NWQSERQIPFGDVRLPPPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFY
VIEYAACDATYNEIVTLERLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEF
KKALGANCIFLNITNSELFILSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKH
LETSKQLAAAFQEEFTVREDLMGLAIGTHGANIHQARKVPGVTAIELGEETCTFRIYG
ETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDK
KNPREEGMVPFIFVGTRENISNAQALLEYHLSYLQEVEQLRLERLQIDEQLRQIGLGF
RPPGSGRGSGGSDKAGYSTDESSSSSLHATRTYGGSYGGRGRGRRTGGPAYGPSSDVS
TASETESEKREEPNRAGPGDRDPPTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSIS
SVLKDPDSNPYSLLDTSEPEPPVDSEPGEPPPASARRRRSRRRRTDEDRTVMDGGLES
DGPNMTENGLEDESRPQRRNRSRRRRNRGNRTDGSISGDRQPVTVADYISRAESQSRQ
RPPLERTKPSEDSLSGQKGDSVSKLPKGPSENGELSAPLELGSMVNGVS"
BASE COUNT 626 a 796 c 841 g 550 t
ORIGIN
1 ggcggacggg gagcggcccg gccccggccc cctgctcgtt ggctgtggca gggccgccgt
61 ggggccggcc cggctcccgc cccccgcggc tccccctccg gctcctcctc cggggagacg
121 ccgggggcct ggcccggccc gcactcagac tgctgctgca gccgccgccg ggggagtcgg
181 aggcggtggc ggcgccatgg gcggcctggc ctctgggggg gatgtggagc cgggactgcc
241 cgtcgaggtg cgcggctcca acggggcctt ctacaagggc tttgtgaagg atgtccatga
301 agactctgtc accatcttct ttgaaaacaa ctggcagagt gagagacaaa ttccttttgg
361 ggatgtccgg ctaccacctc cagctgacta taataaggag atcacagaag gggatgaagt
421 ggaggtttat tctcgagcca atgaacagga accttgtggc tggtggctgg cccgggtgcg
481 gatgatgaag ggagatttct atgtcattga atatgctgcc tgtgatgcca cctacaatga
541 aattgttacc ctggagcgac ttcggccagt taatcccaat ccccttgcaa ccaaaggcag
601 cttcttcaag gttaccatgg ctgtgcccga ggatctgaga gaagcctgct ccaatgaaaa
661 cgtccataaa gagttcaaga aagccctggg agccaactgc atctttctca acatcacaaa
721 cagtgagctc ttcattctgt caaccacaga agcccctgtg aagcgagcat ctctgctggg
781 tgatatgcat ttccgaagcc tgcgcaccaa actgctactt atgtcccgca atgaagaagc
841 taccaagcac ctagagacaa gcaagcagtt ggcagcagcc ttccaagagg agttcacagt
901 gcgagaggac ctgatgggac tggcaattgg gactcacggt gccaacatcc atcaggcccg
961 aaaagtacct ggggtgaccg ccattgagtt gggtgaagag acctgcactt tccgcatcta
1021 tggggagact cccgaggctt gccgacaggc ccgaagctac cttgagtttt ctgaggactc
1081 agtgcaagtg cccaggaacc tggttggcaa agtgattgga aagaacggga aagtgatcca
1141 ggagattgtg gataaatctg gtgtggtgag ggttcgagtg gaaggtgata atgacaagaa
1201 gaaccccagg gaggagggaa tggttccctt catttttgtt ggcacccgag agaacatcag
1261 caatgcccag gctttgctgg agtatcacct ctcctacctg caggaggtag agcagcttcg
1321 cttggagagg ctacaaattg atgagcagct tcggcagatt gggctgggct ttcgccctcc
1381 tgggagtggg cggggcagcg gtggcagcga caaggctgga tatagcactg atgagagctc
1441 ctcctcctcc ctccatgcga ctcgaaccta tgggggcagc tatgggggcc gtggccgtgg
1501 ccggaggaca ggcggtcctg cctatggccc cagctcagat gtgtctacag cttcagagac
1561 tgagtcagag aagagagagg agcccaaccg agctgggcct ggcgacaggg atcccccaac
1621 ccgaggggaa gaaagccgga ggcggccgac tgggggccgg ggtaggggac ccccacctgc
1681 cccccggccc acttcgagat acaattcttc atctattagc tcagtgctga aggatccaga
1741 cagtaatccc tacagcctat tggacacgtc tgaaccagag cccccggttg attcagaacc
1801 tggggaaccc cccccagcaa gtgccaggcg ccgccgctcc cgccgccgcc gcactgatga
1861 agacaggacc gtcatggatg gaggcctgga atcagatggg cccaacatga cagagaatgg
1921 cctggaagat gaatcaagac ctcaacgtcg taatcgcagc cgccgccgcc gtaaccgtgg
1981 taatcggact gatggctcta tcagtggaga ccgccagcca gtgactgtgg ctgactatat
2041 ctcacgagca gagtctcaga gccgccagag gccacccctg gaacgcacta aaccctcaga
2101 agactctctt tcaggacaga agggtgactc tgtcagcaag cttcctaagg gcccctcgga
2161 gaatggggag ctctccgccc ccttggagtt gggtagtatg gtgaatgggg tttcataaaa
2221 cctccaacct gcacccctcc cttctccatc tcgcttgctg cccaacacca tggccctcac
2281 aggcccaact gacctgcgct ggagctgctc ttatctaggg gggagggggg tggcacagca
2341 gcttgggtac cccccaacct ccaggagcta gtggaggggt gtgtaacagg gtcatacccc
2401 ctccctcttg tccaccctac ccccagggta aggggagcct ctctccttcc ccatcagact
2461 ggatgtgcct ttatcctcta atgccccaat ctctctctga acacccccat tctccacctg
2521 ttggtggggg gtgctcctcg acccacccag atttgaccgt tcagggggcc tcccctgcta
2581 tccctcctcc catcctgtac cccccatttc tggggcctca tcactgtgga agacggggat
2641 agtaagagat aagtgggtgg gaggcacggg gaaggttttg gagtagaacc aggggtgtgt
2701 atgaaggggg gtgacaaggt ccccctgggg aggggaccaa ccttgtctgg tggatgagaa
2761 ggcgtattta tttttcactg tacagtattt aaaaagagaa aaaaaaaaaa aaa
//