LOCUS BC051849 819 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RPA interacting protein, mRNA (cDNA clone MGC:60172 IMAGE:5493799), complete cds. ACCESSION BC051849 VERSION BC051849.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 819) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 819) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC051849.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: d Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14149614. FEATURES Location/Qualifiers source 1..819 /db_xref="H-InvDB:HIT000053710" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60172 IMAGE:5493799" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..819 /gene="RPAIN" /gene_synonym="HRIP" /gene_synonym="MGC4189" /gene_synonym="RIP" /db_xref="GeneID:84268" /db_xref="HGNC:HGNC:28641" CDS 4..663 /gene="RPAIN" /gene_synonym="HRIP" /gene_synonym="MGC4189" /gene_synonym="RIP" /codon_start=1 /product="RPA interacting protein" /protein_id="AAH51849.1" /db_xref="GeneID:84268" /db_xref="HGNC:HGNC:28641" /translation="MAESLRSPRRSLYKLVGSPPWKEAFRQRCLERMRNSRDRLLNRY RQAGSSGPGNSQNSFLVQEVMEEEWNALQSVENCPEDLAQLEELIDMAVLEEIQQELI KQEQSIISEYEKSLQFDEKCLSIMLAEWEANPLICPVCTKYNLRITSGVVVCQCGLSI PSHSSELTEQKLRACLEGSINEHSAHCPHTPEFSVTGGTEEKSSLLMSCLACDTWAVI L" BASE COUNT 232 a 171 c 218 g 198 t ORIGIN 1 gagatggcgg agtcgttgag gtctccgcgc cgctccctgt acaaactggt gggctcgccg 61 ccttggaaag aggctttccg gcagagatgc ctggagagaa tgagaaacag ccgggacagg 121 ctcctaaaca ggtaccgcca ggctggaagc agtgggccag ggaattctca gaacagcttt 181 ctagttcaag aggtgatgga agaagagtgg aatgctttgc agtcagtgga gaattgtcca 241 gaagacttgg ctcagttgga ggagctgata gacatggctg tgctggagga aattcaacag 301 gagctgatca agcaagagca gtccatcatc agcgagtatg agaagagctt gcagtttgat 361 gaaaagtgtc tcagcatcat gctggctgag tgggaggcaa acccactcat ctgtcctgta 421 tgtacaaagt acaacctgag aatcacaagc ggtgtggtgg tgtgtcagtg tggcctgtcc 481 atcccatctc attcttctga gttgacagag cagaagcttc gtgcctgttt agagggtagt 541 ataaatgagc acagtgcaca ttgtccccac acacctgaat tttcagtcac tggaggaaca 601 gaagaaaagt ccagtcttct catgagctgt ctggcctgtg atacttgggc tgtgatcctc 661 tagagccagc ttggactcac atcattctat ggggttgaag acaactcatt ccctctgagg 721 agccttgtac atacaagcct tttatttata acttattttg tattgaaact tttaaacaat 781 actgaagaaa aaaaaacttt tccgaaaaaa aaaaaaaaa //