LOCUS BC051848 1223 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 54, mRNA (cDNA clone MGC:60169
IMAGE:6150670), complete cds.
ACCESSION BC051848
VERSION BC051848.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982913.
FEATURES Location/Qualifiers
source 1..1223
/db_xref="H-InvDB:HIT000053709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60169 IMAGE:6150670"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1223
/gene="WDR54"
/gene_synonym="FLJ12953"
/db_xref="GeneID:84058"
/db_xref="HGNC:HGNC:25770"
CDS 61..1065
/gene="WDR54"
/gene_synonym="FLJ12953"
/codon_start=1
/product="WD repeat domain 54"
/protein_id="AAH51848.1"
/db_xref="GeneID:84058"
/db_xref="HGNC:HGNC:25770"
/translation="MFRWERSIPLRGSAAALCNNLSVLQLPARNLTYFGVVHGPSAQL
LSAAPEGVPLAQRQLHAKEGAGVSPPLITQVHWCVLPFRVLLVLTSHRGIQMYESNGY
TMVYWHALDSGDASPVQAVFARGIAASGHFICVGTWSGRVLVFDIPAKGPNIVLSEEL
AGHQMPITDIATEPAQGQDCVADMVTADDSGLLCVWRSGPEFTLLTRIPGFGVPCPSV
QLWQGIIAAGYGNGQVHLYEATTGNLHVQINAHARAICALDLASEVGKLLSAGEDTFV
HIWKLSRNPESGYIEVEHCHGECVADTQLCGARFCDSSGNSFAVTGYDLAEIRRFSSV
"
BASE COUNT 322 a 314 c 334 g 253 t
ORIGIN
1 cggcggattt ggagggaccc tacgaaccag gagtcaggcg agccgatctg gggctgcagg
61 atgttccgct gggagcgctc cattcccctg cgaggctcgg ccgccgccct gtgcaacaac
121 ctcagtgtgc tgcagctgcc ggctcgcaac ctcacgtatt ttggcgtggt tcatggacca
181 agcgcccagc ttctcagcgc tgctcctgag ggtgtgccct tggcccagcg ccagctccac
241 gctaaggagg gtgctggagt gagtccccca cttatcactc aggtccactg gtgtgtcctc
301 cccttccgag tgctgctggt actcacctca catcgaggaa tacagatgta cgagtccaat
361 ggctacacca tggtctactg gcatgcactg gactctggag atgcctcccc agtacaggct
421 gtgtttgccc ggggaattgc tgccagtggc cacttcatct gtgtgggaac gtggtcaggc
481 cgggtgctgg tgtttgacat cccagcaaag ggtcccaaca ttgtactgag cgaggagctg
541 gctgggcacc agatgccaat cacagacatt gccaccgagc ctgcccaggg acaggattgt
601 gtggctgaca tggtgacggc agatgactca ggcttgctgt gtgtctggcg gtcagggcca
661 gaattcacat tattgacccg cattccagga tttggagttc cgtgcccctc tgtgcagctg
721 tggcagggga tcatagcagc aggctatggg aacggacaag tgcatctata tgaggccact
781 acaggaaatc tacatgtcca gatcaatgcc catgcccggg ccatctgcgc cctggacctg
841 gcttctgagg tgggcaagct actctctgca ggtgaggaca cctttgtgca tatctggaag
901 ctgagcagaa acccagagag tggctacatt gaggtggaac actgtcatgg tgagtgtgtc
961 gccgacaccc agctgtgtgg tgctcgattt tgtgattcct caggcaactc ctttgctgtg
1021 actggctatg accttgcgga gatccggaga ttcagcagtg tgtgagaaga gcagccttcc
1081 tttgtccctg tggtattcat aaagtacccg ctccacccaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaa
//