LOCUS BC051845 3768 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens polycomb group ring finger 5, mRNA (cDNA clone
MGC:60159 IMAGE:5199133), complete cds.
ACCESSION BC051845
VERSION BC051845.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3768)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3768)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33300662.
FEATURES Location/Qualifiers
source 1..3768
/db_xref="H-InvDB:HIT000053706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60159 IMAGE:5199133"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3768
/gene="PCGF5"
/gene_synonym="MGC16202"
/gene_synonym="RNF159"
/db_xref="GeneID:84333"
CDS 229..999
/gene="PCGF5"
/gene_synonym="MGC16202"
/gene_synonym="RNF159"
/codon_start=1
/product="PCGF5 protein"
/protein_id="AAH51845.1"
/db_xref="GeneID:84333"
/translation="MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIV
QHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNK
PQENGQDDTSKADKPKVDEEGDENEDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGL
MKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLR
GENFRCLNCSASQVCSQDGPLYQSYPMVLQYRPRIDFG"
BASE COUNT 1300 a 606 c 658 g 1204 t
ORIGIN
1 cgcgccccgc gcggcccgcc cggatcgtgg cctctcgaga gcaagacatg ggaaagcgga
61 accaccaaaa ggagtgatga tcaacgatct catgataaat ctggatgcta gttctcatgc
121 ctcaggacat cctactggga acgacacacc agctcctggg atcagacttt catctactta
181 ggacccctct ttgcccagac tactaaagcc agtcttcact agccacgaat ggctacccaa
241 aggaaacact tggtgaaaga ttttaatcct tacattacct gctatatctg taaagggtat
301 ctgatcaagc caacaacagt gacggaatgc ctccatacat tctgtaagac ttgtattgtt
361 cagcactttg aagatagcaa tgattgccca aggtgtggca accaagttca tgagacaaat
421 ccattagaaa tgttgaggtt ggacaataca ttagaggaaa ttatatttaa gctggtccct
481 ggactacgag aacaagaact tgagcgtgaa tctgaatttt ggaagaaaaa taagcctcaa
541 gaaaatggac aagatgatac ttcaaaagct gacaaaccga aagtagatga agaaggtgat
601 gaaaatgaag atgataaaga ttatcacaga agtgacccac aaattgctat ctgtctagat
661 tgtttacgaa ataatgggca atcaggggac aatgtagtaa agggtttaat gaagaaattc
721 attcgatgtt ctacacgtgt aactgtggga actattaaaa aatttctaag tttaaaacta
781 aaacttccaa gttcttatga gttggatgtg ctgtgcaatg gtgaaattat ggggaaggat
841 catactatgg aattcatcta catgacaaga tggcgactaa gaggcgaaaa ctttcggtgt
901 ctgaactgct cagcttcgca agtctgctct caggatggcc ctttgtatca gtcataccct
961 atggtactgc agtatcgacc aagaattgat ttcggttaga ccaaggggcc cagacctcac
1021 tgagatgaat cctgcactat ttgtttactc gtcaacagat tgcacagtta acggtgtgtg
1081 gactagagga acacaaccag attttcagca tgcaaataag gccattgtct atctctaaat
1141 tgtcagttgc attcatgttg tttctattag gagcaaacca agtgccattc tgctactgaa
1201 ccatctgcat aaggtatttg tgttgtctca aagtgtgcaa gtcatggtaa aaatcagtta
1261 gctgtgccgc catgattcac ccttctgaat attttgcttg cctgttccaa gattgttcta
1321 atgtttaatt acactagtaa aatggctcaa tttttgtggt gttgcagttt tcacatactt
1381 actcttttat tcttgtttaa atagcgtact ctacaagaaa ctaataatta tatcttgaaa
1441 ttattttgta tggaagtata tttagaaaag tggtttttga gccactgtct tgttcttgat
1501 aagctttttg tgtgaaaaaa agttcattct tgagtgtgca agtccttttg ccaagaattc
1561 caattattct gtaacattag agcacaatat aattgtagac attctaagca tctgtccgtg
1621 tagtctacca attgcacaag gaaggcatgt tagccctcca gattgaaaat gtatgtgacc
1681 tcttgaactg aagttagatt cccaaccatt caaaatgttg gcagctgatc acatttactt
1741 ctgataaaag taatgtgtaa gtaaggttaa tcttctttca taatgcctta tgacaagcag
1801 gtgctgcttc atgaaacgtc attgtatagc ccatttcatg tatcattaca ttgttgctgt
1861 tatttaatga gtgcattatt tctcttttta agttggcctt aggtatatgt cattgtggca
1921 tgcagagggt tatgacgatt ttaaatatta ggatttttag agcacataac attagctatt
1981 ttatggattt caaaagtctc aaaacagttg tagattaaaa ctgttagtta cctttcacat
2041 ttccaaacta tgtgcataaa atagaataaa tgcagtatag aactatgcta accaaaatta
2101 ataggttaag ggtattttat tttaaatcct gtagtaattg gggaaatgag aagattatta
2161 ttttatacat gagttcatta agatcagaaa tacaaaatgt cctgtatttt gcagttttgt
2221 taagtcttcc attcgtttta ggattagtct gcaagtcaaa gaaagtcttg ttaccttaaa
2281 ttatatgaaa actgtcattt taaatctttt aatatttaca gttttcaaaa accttacttg
2341 gaaattgctt tgaaacaaac aagctaacct ttgaaactta ggaaaaaatc ttgaaagtta
2401 ggaaaaatat ttgagaaata tgacgagcac aatctgtgtg ttacacacat ttagttttta
2461 tactgcatat gtggtaaatg tgtcacattt tccagtaaaa tgtatcagaa atcaatgcct
2521 tctgaatttc aaaatgattc ttagaaataa gatattgtac aactctagca aacatacaaa
2581 gtacagctaa atcttaatat atttcactat gtaaaaggct gaaacttcat aattatctgt
2641 tccttctatc tttttttgag tcaaaaagtc tattaaattt ttctgttgtt gttccaactt
2701 tggtgaaaaa ggttatggca atactttaac tttgttttgt tacattgttt ttgttcttgg
2761 aatggctcac aagcagaatt taaaaggcag attttcatta actataaatg gctgaaaaaa
2821 ctgaatttac tatctagcta cagaaattat ttttctatgg tgtgaaactg ttcccagaca
2881 tccctaagaa cttttacaaa ttattataaa tttgtcacac ctaggtcagc gattaaaata
2941 gtgttttgca aatggaattt taattaactc aaaatgaatt aagagtgcat tttaaaaatc
3001 acaagtgaga ctttgatgtt ttggcccccc agccaaaact taatggtcat aaatgaattt
3061 tatctacaaa atctctttaa atttggctgg ttgccttgtc atatgtaatt tcactatttt
3121 ccaaggaaat atataggaag caattatgaa actgagaata gttttatata gaattctttt
3181 atttactgat aatgcattaa catttttatt gaaatgcaat ggaatatgtg ccaaaacacg
3241 tgaaaagctt acataaagaa aggcatcagt tgtcgtttgg agaaaggtac acattttttt
3301 gatggtccta agtgatatgg tattactact agaatcacag atttcttcaa ctgacttatt
3361 ttggtatatt caactacagc tttctaagga taggactact ttcatgtcta gtaatacact
3421 gtattccccg ttaattatcc cttaagtcag attgtagaat ttgcaagaaa ctaggtatag
3481 aaaaaatgta caggcaactt ttgtggttag ctttataaat ttagggtgct tataaaatga
3541 taaaatgaat tctttaaata acctatagga atcatctgaa tctgtaacat cagagactaa
3601 aactaaaagt tttctttaat ctgttgtttc ttaagcaata aactgaaaga cctttacttc
3661 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3721 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//