LOCUS BC051820 2246 bp mRNA linear HUM 08-OCT-2003
DEFINITION Homo sapiens RAB3A interacting protein (rabin3)-like 1, mRNA (cDNA
clone MGC:60065 IMAGE:5188805), complete cds.
ACCESSION BC051820
VERSION BC051820.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2246)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2246)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361439.
FEATURES Location/Qualifiers
source 1..2246
/db_xref="H-InvDB:HIT000053692"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60065 IMAGE:5188805"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2246
/gene="RAB3IL1"
/db_xref="GeneID:5866"
CDS 78..1148
/gene="RAB3IL1"
/codon_start=1
/product="RAB3IL1 protein"
/protein_id="AAH51820.1"
/db_xref="GeneID:5866"
/translation="MDSSEEHAGCPARGTCPVFLAMSAGTVRYAPSGLCPVLEGNLRE
EPWGTDSPPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPA
AAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEE
LTASLFEEAHKMVREANMKQAASEKQLKEARGKVDTILFAEFQAWRESPTLDKTCPFL
ERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTNTC
ALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVRQDAEPMF
WEIMRLRKEMSLAKLGFFPQEA"
BASE COUNT 556 a 697 c 633 g 360 t
ORIGIN
1 ctggtggggg gaagaaggct cctgctacct cccttcccgg caccctccag agggaccctc
61 agtctggtct tgcaagcatg gactcttctg aggagcacgc tgggtgcccc gcccgaggga
121 catgtcccgt gttcctggcc atgagtgcag ggactgtccg ctacgcccca tcaggcctgt
181 gccctgtact tgaggggaac ttgagagaag agccctgggg cacagacagc ccaccccagc
241 cagaccaggg cctcccgccg ccccttgcag ctgtcccggt cccctggaag agcacggacc
301 cctgccaagg ccacagggag tccccaggag ccctggtgga gacctctgca ggggaggagg
361 cccaaggcca ggagggcccc gcagccgccc agctggacgt gttgcgcctg cgcagctctt
421 ccatggagat ccgagagaag ggctccgagt tcctgaagga ggagctgcac agagcgcaga
481 aggagctgaa gctaaaggac gaggaatgtg agcggctgtc caaggtgcgg gagcagctag
541 aacaggagct ggaagagctg acggccagcc tgtttgagga agctcacaag atggttcgag
601 aagccaacat gaagcaggcg gcatcagaaa agcagctgaa ggaggctcgg ggcaaggtgg
661 acacaatcct gtttgcagag ttccaggcct ggagggaatc ccccaccctg gacaagacct
721 gccccttcct ggaaagggtg taccgagagg acgtgggccc ctgcctggac ttcacaatgc
781 aggagctctc ggtgctggta cgggccgccg tggaggacaa cacgctcacc attgagccgg
841 tggcttcgca gacgctgccc acagtgaagg tggccgaggt tgactgtagc agcaccaaca
901 catgtgccct gagcgggctg acccgcacct gccgccaccg aatccggctc ggggactcca
961 aaagccatta ctacatctcg ccatcttccc gggccaggat caccgcagtg tgcaacttct
1021 tcacctacat ccgctacatc cagcaaggcc tggtgcggca ggacgcagag cccatgttct
1081 gggagatcat gaggttgcgg aaggagatgt cactggccaa gctcggcttc ttcccccagg
1141 aggcttaggg cgcggcccag gcctgaaggg gagctctgag acagagcaaa cacccacccc
1201 agaacaagcc gacacacagg gagacggggg cctggagcca gccctgagcc agaggcagaa
1261 tggatggaca gacaggccat ggaggcagca ctgagccagc accacacgtc catcctggga
1321 cagacgggcc tggacttcac ggcaagaccc ccctctcttc cccactgggt tctgccacca
1381 ccaggaggat ttcaagaaag caccaaagac cagggagctc ggatccatac tcggggggcc
1441 tcagcccttg ggaggggaca cctgaggcag ccagcgcccc ctccccagtc cccagaactg
1501 cctgcaggtg ccttgttgct ggcttgtctt cagaaaggga ctgttctggg tggctggatc
1561 tccagggtac cctccacccc agctgccaag ccctgggcca gcagcacccc cttgtggcca
1621 tcctgtgcct tgttcccggt ggcctcccta ttggactact aggaggggct ggcagggcct
1681 ccatagcaca gaattgcccc aaagccttgt taagatgagt caagacccct cccccgcttc
1741 ctcccttcct ttcccccttc ctccctcccc cttcacaaag gcctcccttg tcaccttccc
1801 tcccaccccg tctcagccct gtgctcctgg aggccctgct cccaaaaccg ctggaaggac
1861 tggggcactt tctgccacag tagaacacag acagggcttc agatcgccca cgcctgtttt
1921 cagctgtggg tggccatgca gacacgcgcc ctggcatgtg gggcctgggt gggcaggcag
1981 gacctgggcc ctcccaccca tcagagccca ctcaggacca gcgttcggag ctcccacctg
2041 gacgcatccc tcaccacgtc cggatttcct tctttggatg gaatgtaacg cgatctctat
2101 ttaataaagg caggctttgt tggtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaa
//